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PyDISH No: 07754

PDB: 3zby,
chainID: B, resSeq: 1402
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 1.93 Å

axial ligand #1: CYS

chainID: B,
resSeq: 343,
Coordination distance[Å]: 2.212
molecule: P450 HEME-THIOLATE PROTEIN
Organism: Mycobacterium smegmatis str. MC2 155

axial ligand #2: EDO

chainID: B,
resSeq: 1409,
Coordination distance[Å]: 1.858
molecule: 1,2-ETHANEDIOL

List of other hemes in pdb:3zby

ID of heme Distortion Axial ligands on heme Function & structure
3zby-A-1402
sad. -0.06
ruf. -0.47
dom. -0.01
bre. -0.33
CYS chainID: A,
resSeq: 343,
molecule: P450 HEME-THIOLATE PROTEIN
oxidoreductase
oligomeric count: 2
pocket vol.: 371.0 Å3
d(Fe-oop): 0.076 Å
EDO chainID: A, resSeq: 1406,
molecule: 1,2-ETHANEDIOL
3zby-C-1402
sad. -0.08
ruf. -0.38
dom. +0.02
bre. -0.34
CYS chainID: C,
resSeq: 343,
molecule: P450 HEME-THIOLATE PROTEIN
oxidoreductase
oligomeric count: 2
pocket vol.: 379.0 Å3
d(Fe-oop): 0.086 Å
EDO chainID: C, resSeq: 1407,
molecule: 1,2-ETHANEDIOL
3zby-D-1402
sad. -0.06
ruf. -0.35
dom. -0.01
bre. -0.22
CYS chainID: D,
resSeq: 343,
molecule: P450 HEME-THIOLATE PROTEIN
oxidoreductase
oligomeric count: 2
pocket vol.: 369.0 Å3
d(Fe-oop): 0.066 Å
EDO chainID: D, resSeq: 1407,
molecule: 1,2-ETHANEDIOL
3zby-E-1402
sad. -0.04
ruf. -0.44
dom. -0.01
bre. -0.29
CYS chainID: E,
resSeq: 343,
molecule: P450 HEME-THIOLATE PROTEIN
oxidoreductase
oligomeric count: 2
pocket vol.: 383.0 Å3
d(Fe-oop): 0.059 Å
EDO chainID: E, resSeq: 1407,
molecule: 1,2-ETHANEDIOL
3zby-F-1402
sad. -0.12
ruf. -0.40
dom. -0.04
bre. -0.21
CYS chainID: F,
resSeq: 343,
molecule: P450 HEME-THIOLATE PROTEIN
oxidoreductase
oligomeric count: 2
pocket vol.: 368.0 Å3
d(Fe-oop): 0.074 Å
EDO chainID: F, resSeq: 1407,
molecule: 1,2-ETHANEDIOL