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PyDISH No: 07579

PDB: 3veg,
chainID: B, resSeq: 401
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.35 Å

axial ligand #1: HIS

chainID: B,
resSeq: 226,
Coordination distance[Å]: 2.04
molecule: DypB
EC number: 1.11.1.-
Organism: Rhodococcus jostii

axial ligand #2: HOH

chainID: B,
resSeq: 643,
Coordination distance[Å]: 1.907
molecule: water

List of other hemes in pdb:3veg

ID of heme Distortion Axial ligands on heme Function & structure
3veg-A-401
sad. +0.26
ruf. +0.08
dom. +0.07
bre. -0.07
HIS chainID: A,
resSeq: 226,
molecule: DypB
oxidoreductase
oligomeric count: 6
pocket vol.: 466.0 Å3
d(Fe-oop): 0.029 Å
HOH chainID: A, resSeq: 657,
molecule: water
3veg-C-401
sad. +0.28
ruf. +0.01
dom. +0.04
bre. -0.07
HIS chainID: C,
resSeq: 226,
molecule: DypB
oxidoreductase
oligomeric count: 6
pocket vol.: 441.0 Å3
d(Fe-oop): 0.003 Å
HOH chainID: C, resSeq: 585,
molecule: water