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PyDISH No: 07567

PDB: 3vec,
chainID: B, resSeq: 401
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.6 Å

axial ligand #1: HIS

chainID: B,
resSeq: 226,
Coordination distance[Å]: 1.909
molecule: DypB
EC number: 1.11.1.-
Organism: Rhodococcus jostii

axial ligand #2: CL

chainID: B,
resSeq: 403,
Coordination distance[Å]: 2.412
molecule: CHLORIDE ION

List of other hemes in pdb:3vec

ID of heme Distortion Axial ligands on heme Function & structure
3vec-A-401
sad. +0.27
ruf. +0.11
dom. -0.02
bre. -0.45
HIS chainID: A,
resSeq: 226,
molecule: DypB
oxidoreductase
oligomeric count: 6
pocket vol.: 430.0 Å3
d(Fe-oop): 0.292 Å
CL chainID: A, resSeq: 403,
molecule: CHLORIDE ION
3vec-C-401
sad. +0.37
ruf. +0.27
dom. +0.06
bre. -0.39
HIS chainID: C,
resSeq: 226,
molecule: DypB
oxidoreductase
oligomeric count: 6
pocket vol.: 441.0 Å3
d(Fe-oop): 0.382 Å
CL chainID: C, resSeq: 403,
molecule: CHLORIDE ION