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PyDISH No: 07557

PDB: 3uu9,
chainID: B, resSeq: 605
heme type: C

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.2 Å

axial ligand #1: HIS

chainID: B,
resSeq: 372,
Coordination distance[Å]: 1.905
molecule: Eight-heme nitrite reductase
EC number: 1.7.2.-
Organism: Thioalkalivibrio nitratireducens

axial ligand #2: HIS

chainID: B,
resSeq: 415,
Coordination distance[Å]: 1.863
molecule: same as ligand #1

List of other hemes in pdb:3uu9

ID of heme	Distortion	Axial ligands on heme		Function & structure
3uu9-A-601	`sad. +0.63 ruf. -0.46 dom. +0.13 bre. -0.09`	LYS	chainID: A, resSeq: 188, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 393.0 Å³ d(Fe-oop): 0.117 Å
3uu9-A-601	`sad. +0.63 ruf. -0.46 dom. +0.13 bre. -0.09`	HOH	chainID: A, resSeq: 1000, molecule: water
3uu9-A-602	`sad. +1.04 ruf. -0.25 dom. -0.04 bre. +0.09`	HIS	chainID: A, resSeq: 231, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 462.0 Å³ d(Fe-oop): 0.072 Å
3uu9-A-602	`sad. +1.04 ruf. -0.25 dom. -0.04 bre. +0.09`	HIS	chainID: A, resSeq: 398, molecule: Eight-heme nitrite reductase
3uu9-A-603	`sad. -0.26 ruf. -0.80 dom. +0.22 bre. -0.03`	HIS	chainID: A, resSeq: 119, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 389.0 Å³ d(Fe-oop): 0.018 Å
3uu9-A-603	`sad. -0.26 ruf. -0.80 dom. +0.22 bre. -0.03`	HIS	chainID: A, resSeq: 300, molecule: Eight-heme nitrite reductase
3uu9-A-604	`sad. +0.72 ruf. -0.61 dom. -0.09 bre. +0.01`	HIS	chainID: A, resSeq: 383, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 430.0 Å³ d(Fe-oop): 0.059 Å
3uu9-A-604	`sad. +0.72 ruf. -0.61 dom. -0.09 bre. +0.01`	HIS	chainID: A, resSeq: 491, molecule: Eight-heme nitrite reductase
3uu9-A-605	`sad. -0.45 ruf. -0.77 dom. +0.27 bre. -0.11`	HIS	chainID: A, resSeq: 372, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 544.0 Å³ d(Fe-oop): 0.049 Å
3uu9-A-605	`sad. -0.45 ruf. -0.77 dom. +0.27 bre. -0.11`	HIS	chainID: A, resSeq: 415, molecule: Eight-heme nitrite reductase
3uu9-A-606	`sad. -0.12 ruf. -0.39 dom. -0.01 bre. -0.16`	HIS	chainID: A, resSeq: 39, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 340.0 Å³ d(Fe-oop): 0.071 Å
3uu9-A-606	`sad. -0.12 ruf. -0.39 dom. -0.01 bre. -0.16`	HIS	chainID: A, resSeq: 234, molecule: Eight-heme nitrite reductase
3uu9-A-607	`sad. +0.43 ruf. -0.46 dom. -0.01 bre. -0.04`	HIS	chainID: A, resSeq: 30, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 488.0 Å³ d(Fe-oop): 0.008 Å
3uu9-A-607	`sad. +0.43 ruf. -0.46 dom. -0.01 bre. -0.04`	HIS	chainID: A, resSeq: 70, molecule: Eight-heme nitrite reductase
3uu9-A-608	`sad. -0.02 ruf. -0.37 dom. +0.01 bre. -0.26`	HIS	chainID: A, resSeq: 18, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 409.0 Å³ d(Fe-oop): 0.018 Å
3uu9-A-608	`sad. -0.02 ruf. -0.37 dom. +0.01 bre. -0.26`	HIS	chainID: A, resSeq: 44, molecule: Eight-heme nitrite reductase
3uu9-B-601	`sad. +0.59 ruf. -0.42 dom. +0.17 bre. -0.10`	LYS	chainID: B, resSeq: 188, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 366.0 Å³ d(Fe-oop): 0.060 Å
3uu9-B-601	`sad. +0.59 ruf. -0.42 dom. +0.17 bre. -0.10`	HOH	chainID: B, resSeq: 1012, molecule: water
3uu9-B-602	`sad. +1.14 ruf. -0.27 dom. -0.05 bre. +0.00`	HIS	chainID: B, resSeq: 231, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 485.0 Å³ d(Fe-oop): 0.058 Å
3uu9-B-602	`sad. +1.14 ruf. -0.27 dom. -0.05 bre. +0.00`	HIS	chainID: B, resSeq: 398, molecule: Eight-heme nitrite reductase
3uu9-B-603	`sad. -0.23 ruf. -0.75 dom. +0.22 bre. -0.04`	HIS	chainID: B, resSeq: 119, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 389.0 Å³ d(Fe-oop): 0.023 Å
3uu9-B-603	`sad. -0.23 ruf. -0.75 dom. +0.22 bre. -0.04`	HIS	chainID: B, resSeq: 300, molecule: Eight-heme nitrite reductase
3uu9-B-604	`sad. +0.76 ruf. -0.52 dom. -0.11 bre. +0.01`	HIS	chainID: B, resSeq: 383, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 416.0 Å³ d(Fe-oop): 0.086 Å
3uu9-B-604	`sad. +0.76 ruf. -0.52 dom. -0.11 bre. +0.01`	HIS	chainID: B, resSeq: 491, molecule: Eight-heme nitrite reductase
3uu9-B-606	`sad. -0.18 ruf. -0.42 dom. +0.04 bre. -0.23`	HIS	chainID: B, resSeq: 39, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 328.0 Å³ d(Fe-oop): 0.041 Å
3uu9-B-606	`sad. -0.18 ruf. -0.42 dom. +0.04 bre. -0.23`	HIS	chainID: B, resSeq: 234, molecule: Eight-heme nitrite reductase
3uu9-B-607	`sad. +0.32 ruf. -0.43 dom. +0.06 bre. +0.09`	HIS	chainID: B, resSeq: 30, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 521.0 Å³ d(Fe-oop): 0.067 Å
3uu9-B-607	`sad. +0.32 ruf. -0.43 dom. +0.06 bre. +0.09`	HIS	chainID: B, resSeq: 70, molecule: Eight-heme nitrite reductase
3uu9-B-608	`sad. -0.24 ruf. -0.31 dom. -0.04 bre. -0.27`	HIS	chainID: B, resSeq: 18, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 400.0 Å³ d(Fe-oop): 0.090 Å
3uu9-B-608	`sad. -0.24 ruf. -0.31 dom. -0.04 bre. -0.27`	HIS	chainID: B, resSeq: 44, molecule: Eight-heme nitrite reductase