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PyDISH No: 07434

PDB: 3ufk,
chainID: A, resSeq: 904
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 2.1 Å

axial ligand #1: HIS

chainID: A,
resSeq: 390,
Coordination distance[Å]: 1.905
molecule: UndA
Organism: Shewanella sp. HRCR_06

axial ligand #2: HIS

chainID: A,
resSeq: 460,
Coordination distance[Å]: 1.899
molecule: same as ligand #1

List of other hemes in pdb:3ufk

ID of heme Distortion Axial ligands on heme Function & structure
3ufk-A-901
sad. -0.02
ruf. -0.11
dom. +0.01
bre. -0.16
HIS chainID: A,
resSeq: 256,
molecule: UndA
electron transporter
oligomeric count: 1
pocket vol.: 462.0 Å3
d(Fe-oop): 0.013 Å
HIS chainID: A, resSeq: 310,
molecule: UndA
3ufk-A-902
sad. -0.64
ruf. -0.54
dom. -0.15
bre. -0.06
HIS chainID: A,
resSeq: 273,
molecule: UndA
electron transporter
oligomeric count: 1
pocket vol.: 436.0 Å3
d(Fe-oop): 0.025 Å
HIS chainID: A, resSeq: 287,
molecule: UndA
3ufk-A-903
sad. -0.26
ruf. -0.12
dom. -0.01
bre. -0.18
HIS chainID: A,
resSeq: 307,
molecule: UndA
electron transporter
oligomeric count: 1
pocket vol.: 390.0 Å3
d(Fe-oop): 0.004 Å
HIS chainID: A, resSeq: 365,
molecule: UndA
3ufk-A-905
sad. +0.31
ruf. -0.40
dom. -0.14
bre. -0.23
HIS chainID: A,
resSeq: 420,
molecule: UndA
electron transporter
oligomeric count: 1
pocket vol.: 430.0 Å3
d(Fe-oop): 0.016 Å
HIS chainID: A, resSeq: 448,
molecule: UndA
3ufk-A-906
sad. +0.02
ruf. -0.49
dom. +0.20
bre. -0.21
HIS chainID: A,
resSeq: 657,
molecule: UndA
electron transporter
oligomeric count: 1
pocket vol.: 385.0 Å3
d(Fe-oop): 0.008 Å
HIS chainID: A, resSeq: 728,
molecule: UndA
3ufk-A-907
sad. +0.17
ruf. -0.01
dom. -0.07
bre. -0.21
HIS chainID: A,
resSeq: 684,
molecule: UndA
electron transporter
oligomeric count: 1
pocket vol.: 367.0 Å3
d(Fe-oop): 0.010 Å
HIS chainID: A, resSeq: 709,
molecule: UndA
3ufk-A-908
sad. +0.07
ruf. +0.01
dom. +0.08
bre. -0.09
HIS chainID: A,
resSeq: 667,
molecule: UndA
electron transporter
oligomeric count: 1
pocket vol.: 354.0 Å3
d(Fe-oop): 0.007 Å
HIS chainID: A, resSeq: 703,
molecule: UndA
3ufk-A-909
sad. +0.11
ruf. +0.16
dom. -0.03
bre. -0.26
HIS chainID: A,
resSeq: 725,
molecule: UndA
electron transporter
oligomeric count: 1
pocket vol.: 406.0 Å3
d(Fe-oop): 0.001 Å
HIS chainID: A, resSeq: 755,
molecule: UndA
3ufk-A-910
sad. -0.22
ruf. -0.24
dom. -0.08
bre. -0.34
HIS chainID: A,
resSeq: 789,
molecule: UndA
electron transporter
oligomeric count: 1
pocket vol.: 566.0 Å3
d(Fe-oop): 0.009 Å
HIS chainID: A, resSeq: 839,
molecule: UndA
3ufk-A-911
sad. +0.56
ruf. -0.70
dom. +0.01
bre. -0.19
HIS chainID: A,
resSeq: 801,
molecule: UndA
electron transporter
oligomeric count: 1
pocket vol.: 541.0 Å3
d(Fe-oop): 0.009 Å
HIS chainID: A, resSeq: 827,
molecule: UndA