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Protein data
function: oxidoreductaseexperiment: X-RAY DIFFRACTION
resolution: 2.0 Å
axial ligand #1: LYS
chainID: B,resSeq: 126,
Coordination distance[Å]: 2.117
molecule: Cytochrome c nitrite reductase
EC number: 1.7.2.2
Organism: Escherichia coli
axial ligand #2: HOH
chainID: B,resSeq: 829,
Coordination distance[Å]: 2.234
molecule: water
List of other hemes in pdb:3tor
| ID of heme | Distortion | Axial ligands on heme | Function & structure | |
|---|---|---|---|---|
3tor-A-3 |
sad. +0.55 ruf. -0.52 dom. +0.26 bre. -0.19 |
LYS | chainID: A, resSeq: 126, molecule: Cytochrome c nitrite reductase |
oxidoreductase oligomeric count: 2 pocket vol.: 454.0 Å3 d(Fe-oop): 0.058 Å |
| HOH | chainID: A, resSeq: 1316, molecule: water |
|||
3tor-A-4 |
sad. +0.60 ruf. -0.80 dom. -0.08 bre. -0.17 |
HIS | chainID: A, resSeq: 164, molecule: Cytochrome c nitrite reductase |
oxidoreductase oligomeric count: 2 pocket vol.: 372.0 Å3 d(Fe-oop): 0.047 Å |
| HIS | chainID: A, resSeq: 301, molecule: Cytochrome c nitrite reductase |
|||
3tor-A-5 |
sad. -0.22 ruf. -0.91 dom. +0.10 bre. -0.12 |
HIS | chainID: A, resSeq: 94, molecule: Cytochrome c nitrite reductase |
oxidoreductase oligomeric count: 2 pocket vol.: 402.0 Å3 d(Fe-oop): 0.028 Å |
| HIS | chainID: A, resSeq: 213, molecule: Cytochrome c nitrite reductase |
|||
3tor-A-6 |
sad. -0.24 ruf. -1.03 dom. +0.17 bre. -0.06 |
HIS | chainID: A, resSeq: 286, molecule: Cytochrome c nitrite reductase |
oxidoreductase oligomeric count: 2 pocket vol.: 456.0 Å3 d(Fe-oop): 0.007 Å |
| HIS | chainID: A, resSeq: 393, molecule: Cytochrome c nitrite reductase |
|||
3tor-A-7 |
sad. +0.17 ruf. -0.53 dom. +0.13 bre. -0.30 |
HIS | chainID: A, resSeq: 275, molecule: Cytochrome c nitrite reductase |
oxidoreductase oligomeric count: 2 pocket vol.: 496.0 Å3 d(Fe-oop): 0.041 Å |
| HIS | chainID: A, resSeq: 318, molecule: Cytochrome c nitrite reductase |
|||
3tor-B-4 |
sad. +0.50 ruf. -0.72 dom. -0.14 bre. -0.12 |
HIS | chainID: B, resSeq: 164, molecule: Cytochrome c nitrite reductase |
oxidoreductase oligomeric count: 2 pocket vol.: 338.0 Å3 d(Fe-oop): 0.031 Å |
| HIS | chainID: B, resSeq: 301, molecule: Cytochrome c nitrite reductase |
|||
3tor-B-5 |
sad. -0.21 ruf. -0.93 dom. +0.09 bre. -0.14 |
HIS | chainID: B, resSeq: 94, molecule: Cytochrome c nitrite reductase |
oxidoreductase oligomeric count: 2 pocket vol.: 394.0 Å3 d(Fe-oop): 0.029 Å |
| HIS | chainID: B, resSeq: 213, molecule: Cytochrome c nitrite reductase |
|||
3tor-B-6 |
sad. -0.33 ruf. -1.03 dom. +0.11 bre. -0.04 |
HIS | chainID: B, resSeq: 286, molecule: Cytochrome c nitrite reductase |
oxidoreductase oligomeric count: 2 pocket vol.: 430.0 Å3 d(Fe-oop): 0.008 Å |
| HIS | chainID: B, resSeq: 393, molecule: Cytochrome c nitrite reductase |
|||
3tor-B-7 |
sad. +0.21 ruf. -0.51 dom. +0.08 bre. -0.21 |
HIS | chainID: B, resSeq: 275, molecule: Cytochrome c nitrite reductase |
oxidoreductase oligomeric count: 2 pocket vol.: 516.0 Å3 d(Fe-oop): 0.035 Å |
| HIS | chainID: B, resSeq: 318, molecule: Cytochrome c nitrite reductase |
|||
3tor-C-3 |
sad. +0.54 ruf. -0.55 dom. +0.18 bre. -0.18 |
LYS | chainID: C, resSeq: 126, molecule: Cytochrome c nitrite reductase |
oxidoreductase oligomeric count: 2 pocket vol.: 449.0 Å3 d(Fe-oop): 0.067 Å |
| HOH | chainID: C, resSeq: 1045, molecule: water |
|||
3tor-C-4 |
sad. +0.60 ruf. -0.56 dom. -0.17 bre. -0.29 |
HIS | chainID: C, resSeq: 164, molecule: Cytochrome c nitrite reductase |
oxidoreductase oligomeric count: 2 pocket vol.: 343.0 Å3 d(Fe-oop): 0.022 Å |
| HIS | chainID: C, resSeq: 301, molecule: Cytochrome c nitrite reductase |
|||
3tor-C-5 |
sad. -0.17 ruf. -0.77 dom. +0.09 bre. -0.03 |
HIS | chainID: C, resSeq: 94, molecule: Cytochrome c nitrite reductase |
oxidoreductase oligomeric count: 2 pocket vol.: 426.0 Å3 d(Fe-oop): 0.045 Å |
| HIS | chainID: C, resSeq: 213, molecule: Cytochrome c nitrite reductase |
|||
3tor-C-6 |
sad. -0.24 ruf. -1.08 dom. +0.10 bre. -0.06 |
HIS | chainID: C, resSeq: 286, molecule: Cytochrome c nitrite reductase |
oxidoreductase oligomeric count: 2 pocket vol.: 448.0 Å3 d(Fe-oop): 0.044 Å |
| HIS | chainID: C, resSeq: 393, molecule: Cytochrome c nitrite reductase |
|||
3tor-C-7 |
sad. +0.28 ruf. -0.48 dom. +0.12 bre. -0.07 |
HIS | chainID: C, resSeq: 275, molecule: Cytochrome c nitrite reductase |
oxidoreductase oligomeric count: 2 pocket vol.: 500.0 Å3 d(Fe-oop): 0.012 Å |
| HIS | chainID: C, resSeq: 318, molecule: Cytochrome c nitrite reductase |
|||
3tor-D-3 |
sad. +0.52 ruf. -0.52 dom. +0.24 bre. -0.29 |
LYS | chainID: D, resSeq: 126, molecule: Cytochrome c nitrite reductase |
oxidoreductase oligomeric count: 2 pocket vol.: 457.0 Å3 d(Fe-oop): 0.071 Å |
| HOH | chainID: D, resSeq: 613, molecule: water |
|||
3tor-D-4 |
sad. +0.53 ruf. -0.74 dom. -0.22 bre. -0.33 |
HIS | chainID: D, resSeq: 164, molecule: Cytochrome c nitrite reductase |
oxidoreductase oligomeric count: 2 pocket vol.: 349.0 Å3 d(Fe-oop): 0.058 Å |
| HIS | chainID: D, resSeq: 301, molecule: Cytochrome c nitrite reductase |
|||
3tor-D-5 |
sad. -0.17 ruf. -0.72 dom. +0.05 bre. -0.17 |
HIS | chainID: D, resSeq: 94, molecule: Cytochrome c nitrite reductase |
oxidoreductase oligomeric count: 2 pocket vol.: 444.0 Å3 d(Fe-oop): 0.027 Å |
| HIS | chainID: D, resSeq: 213, molecule: Cytochrome c nitrite reductase |
|||
3tor-D-6 |
sad. -0.35 ruf. -1.00 dom. +0.12 bre. +0.04 |
HIS | chainID: D, resSeq: 286, molecule: Cytochrome c nitrite reductase |
oxidoreductase oligomeric count: 2 pocket vol.: 449.0 Å3 d(Fe-oop): 0.044 Å |
| HIS | chainID: D, resSeq: 393, molecule: Cytochrome c nitrite reductase |
|||
3tor-D-7 |
sad. +0.24 ruf. -0.55 dom. +0.17 bre. -0.16 |
HIS | chainID: D, resSeq: 275, molecule: Cytochrome c nitrite reductase |
oxidoreductase oligomeric count: 2 pocket vol.: 510.0 Å3 d(Fe-oop): 0.042 Å |
| HIS | chainID: D, resSeq: 318, molecule: Cytochrome c nitrite reductase |
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