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PyDISH No: 07309

PDB: 3tom,
chainID: D, resSeq: 150
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 2.3 Å

axial ligand #1: MET

chainID: D,
resSeq: 7,
Coordination distance[Å]: 2.256
molecule: Soluble cytochrome b562
Organism: Escherichia coli

axial ligand #2: HIS

chainID: D,
resSeq: 102,
Coordination distance[Å]: 2.012
molecule: same as ligand #1

List of other hemes in pdb:3tom

ID of heme Distortion Axial ligands on heme Function & structure
3tom-A-150
 sad. +0.16
ruf. -0.03
dom. +0.06
bre. -0.26
 MET chainID: A,
resSeq: 7,
molecule: Soluble cytochrome b562		 electron transporter
oligomeric count: 2
pocket vol.: 485.0 Å3
d(Fe-oop): 0.021 Å
HIS chainID: A, resSeq: 102,
molecule: Soluble cytochrome b562
3tom-B-150
 sad. -0.19
ruf. -0.01
dom. -0.05
bre. -0.27
 MET chainID: B,
resSeq: 7,
molecule: Soluble cytochrome b562		 electron transporter
oligomeric count: 2
pocket vol.: 470.0 Å3
d(Fe-oop): 0.021 Å
HIS chainID: B, resSeq: 102,
molecule: Soluble cytochrome b562
3tom-C-150
 sad. +0.15
ruf. +0.18
dom. -0.00
bre. -0.24
 MET chainID: C,
resSeq: 7,
molecule: Soluble cytochrome b562		 electron transporter
oligomeric count: 2
pocket vol.: 450.0 Å3
d(Fe-oop): 0.020 Å
HIS chainID: C, resSeq: 102,
molecule: Soluble cytochrome b562