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PyDISH No: 07282

PDB: 3tgu,
chainID: D, resSeq: 501
heme type: C

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.7 Å

axial ligand #1: HIS

chainID: D,
resSeq: 41,
Coordination distance[Å]: 2.002
molecule: Mitochondrial cytochrome c1, heme protein
EC number: 1.10.2.2
Organism: Gallus gallus

axial ligand #2: MET

chainID: D,
resSeq: 160,
Coordination distance[Å]: 2.187
molecule: same as ligand #1

List of other hemes in pdb:3tgu

ID of heme Distortion Axial ligands on heme Function & structure
3tgu-C-501
sad. +0.21
ruf. -0.21
dom. -0.19
bre. +0.16
HIS chainID: C,
resSeq: 84,
molecule: Cytochrome b
oxidoreductase
oligomeric count: 20
pocket vol.: 419.0 Å3
d(Fe-oop): 0.036 Å
HIS chainID: C, resSeq: 183,
molecule: Cytochrome b
3tgu-C-502
sad. -0.65
ruf. -0.41
dom. +0.24
bre. +0.19
HIS chainID: C,
resSeq: 98,
molecule: Cytochrome b
oxidoreductase
oligomeric count: 20
pocket vol.: 382.0 Å3
d(Fe-oop): 0.027 Å
HIS chainID: C, resSeq: 197,
molecule: Cytochrome b
3tgu-P-501
sad. +0.25
ruf. -0.18
dom. -0.21
bre. +0.13
HIS chainID: P,
resSeq: 84,
molecule: Cytochrome b
oxidoreductase
oligomeric count: 20
pocket vol.: 429.0 Å3
d(Fe-oop): 0.017 Å
HIS chainID: P, resSeq: 183,
molecule: Cytochrome b
3tgu-P-502
sad. -0.71
ruf. -0.41
dom. +0.22
bre. +0.13
HIS chainID: P,
resSeq: 98,
molecule: Cytochrome b
oxidoreductase
oligomeric count: 20
pocket vol.: 405.0 Å3
d(Fe-oop): 0.025 Å
HIS chainID: P, resSeq: 197,
molecule: Cytochrome b
3tgu-Q-501
sad. +0.07
ruf. -0.16
dom. -0.08
bre. +0.16
HIS chainID: Q,
resSeq: 41,
molecule: Mitochondrial cytochrome c1, heme protein
oxidoreductase
oligomeric count: 20
pocket vol.: 442.0 Å3
d(Fe-oop): 0.001 Å
MET chainID: Q, resSeq: 160,
molecule: Mitochondrial cytochrome c1, heme protein