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PyDISH No: 07198

PDB: 3sxq,
chainID: A, resSeq: 1006
heme type: C

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 1.9 Å
origomeric count: 6

axial ligand #1: HIS

chainID: A,
resSeq: 119,
Coordination distance[Å]: 1.962
molecule: Eight-heme nitrite reductase
Organism: Thioalkalivibrio paradoxus

axial ligand #2: HIS

chainID: A,
resSeq: 300,
Coordination distance[Å]: 1.968
molecule: same as ligand #1

List of other hemes in pdb:3sxq

ID of heme	Distortion	Axial ligands on heme		Function & structure
3sxq-A-1004	`sad. +0.54 ruf. -0.41 dom. +0.14 bre. -0.21`	LYS	chainID: A, resSeq: 188, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 417.0 Å³ d(Fe-oop): 0.057 Å
3sxq-A-1004	`sad. +0.54 ruf. -0.41 dom. +0.14 bre. -0.21`	HOH	chainID: A, resSeq: 793, molecule: water
3sxq-A-1005	`sad. +1.02 ruf. -0.42 dom. +0.06 bre. -0.08`	HIS	chainID: A, resSeq: 231, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 498.0 Å³ d(Fe-oop): 0.053 Å
3sxq-A-1005	`sad. +1.02 ruf. -0.42 dom. +0.06 bre. -0.08`	HIS	chainID: A, resSeq: 398, molecule: Eight-heme nitrite reductase
3sxq-A-1007	`sad. +0.73 ruf. -0.64 dom. -0.13 bre. -0.06`	HIS	chainID: A, resSeq: 383, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 433.0 Å³ d(Fe-oop): 0.068 Å
3sxq-A-1007	`sad. +0.73 ruf. -0.64 dom. -0.13 bre. -0.06`	HIS	chainID: A, resSeq: 491, molecule: Eight-heme nitrite reductase
3sxq-A-1008	`sad. -0.48 ruf. -0.84 dom. +0.14 bre. -0.11`	HIS	chainID: A, resSeq: 372, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 571.0 Å³ d(Fe-oop): 0.026 Å
3sxq-A-1008	`sad. -0.48 ruf. -0.84 dom. +0.14 bre. -0.11`	HIS	chainID: A, resSeq: 415, molecule: Eight-heme nitrite reductase
3sxq-A-1002	`sad. -0.21 ruf. -0.39 dom. +0.00 bre. -0.36`	HIS	chainID: A, resSeq: 39, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 386.0 Å³ d(Fe-oop): 0.017 Å
3sxq-A-1002	`sad. -0.21 ruf. -0.39 dom. +0.00 bre. -0.36`	HIS	chainID: A, resSeq: 234, molecule: Eight-heme nitrite reductase
3sxq-A-1003	`sad. +0.21 ruf. -0.33 dom. +0.04 bre. -0.07`	HIS	chainID: A, resSeq: 30, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 536.0 Å³ d(Fe-oop): 0.020 Å
3sxq-A-1003	`sad. +0.21 ruf. -0.33 dom. +0.04 bre. -0.07`	HIS	chainID: A, resSeq: 70, molecule: Eight-heme nitrite reductase
3sxq-A-1001	`sad. -0.01 ruf. -0.33 dom. -0.08 bre. -0.33`	HIS	chainID: A, resSeq: 18, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 413.0 Å³ d(Fe-oop): 0.065 Å
3sxq-A-1001	`sad. -0.01 ruf. -0.33 dom. -0.08 bre. -0.33`	HIS	chainID: A, resSeq: 44, molecule: Eight-heme nitrite reductase
3sxq-B-1004	`sad. +0.56 ruf. -0.43 dom. +0.15 bre. -0.24`	LYS	chainID: B, resSeq: 188, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 382.0 Å³ d(Fe-oop): 0.043 Å
3sxq-B-1004	`sad. +0.56 ruf. -0.43 dom. +0.15 bre. -0.24`	HOH	chainID: B, resSeq: 795, molecule: water
3sxq-B-1005	`sad. +1.02 ruf. -0.40 dom. +0.05 bre. -0.11`	HIS	chainID: B, resSeq: 231, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 487.0 Å³ d(Fe-oop): 0.053 Å
3sxq-B-1005	`sad. +1.02 ruf. -0.40 dom. +0.05 bre. -0.11`	HIS	chainID: B, resSeq: 398, molecule: Eight-heme nitrite reductase
3sxq-B-1006	`sad. -0.12 ruf. -0.90 dom. +0.19 bre. -0.19`	HIS	chainID: B, resSeq: 119, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 413.0 Å³ d(Fe-oop): 0.030 Å
3sxq-B-1006	`sad. -0.12 ruf. -0.90 dom. +0.19 bre. -0.19`	HIS	chainID: B, resSeq: 300, molecule: Eight-heme nitrite reductase
3sxq-B-1007	`sad. +0.72 ruf. -0.61 dom. -0.11 bre. -0.13`	HIS	chainID: B, resSeq: 383, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 448.0 Å³ d(Fe-oop): 0.055 Å
3sxq-B-1007	`sad. +0.72 ruf. -0.61 dom. -0.11 bre. -0.13`	HIS	chainID: B, resSeq: 491, molecule: Eight-heme nitrite reductase
3sxq-B-1008	`sad. -0.44 ruf. -0.89 dom. +0.13 bre. -0.10`	HIS	chainID: B, resSeq: 372, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 586.0 Å³ d(Fe-oop): 0.029 Å
3sxq-B-1008	`sad. -0.44 ruf. -0.89 dom. +0.13 bre. -0.10`	HIS	chainID: B, resSeq: 415, molecule: Eight-heme nitrite reductase
3sxq-B-1002	`sad. -0.20 ruf. -0.44 dom. +0.02 bre. -0.31`	HIS	chainID: B, resSeq: 39, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 376.0 Å³ d(Fe-oop): 0.045 Å
3sxq-B-1002	`sad. -0.20 ruf. -0.44 dom. +0.02 bre. -0.31`	HIS	chainID: B, resSeq: 234, molecule: Eight-heme nitrite reductase
3sxq-B-1003	`sad. +0.30 ruf. -0.32 dom. -0.01 bre. -0.15`	HIS	chainID: B, resSeq: 30, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 548.0 Å³ d(Fe-oop): 0.039 Å
3sxq-B-1003	`sad. +0.30 ruf. -0.32 dom. -0.01 bre. -0.15`	HIS	chainID: B, resSeq: 70, molecule: Eight-heme nitrite reductase
3sxq-B-1001	`sad. +0.07 ruf. -0.24 dom. -0.04 bre. -0.35`	HIS	chainID: B, resSeq: 18, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 442.0 Å³ d(Fe-oop): 0.032 Å
3sxq-B-1001	`sad. +0.07 ruf. -0.24 dom. -0.04 bre. -0.35`	HIS	chainID: B, resSeq: 44, molecule: Eight-heme nitrite reductase