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PyDISH No: 06986

PDB: 3r1a,
chainID: D, resSeq: 500
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 3.5 Å
origomeric count: 1

axial ligand #1: CYS

chainID: D,
resSeq: 436,
Coordination distance[Å]: 2.542
molecule: Cytochrome P450 2B4
EC number: 1.14.14.1
Organism: Oryctolagus cuniculus

List of other hemes in pdb:3r1a

ID of heme Distortion Axial ligands on heme Function & structure
3r1a-A-500
sad. -0.08
ruf. -0.16
dom. +0.27
bre. -0.23
CYS chainID: A,
resSeq: 436,
molecule: Cytochrome P450 2B4
oxidoreductase
oligomeric count: 1
pocket vol.: 408.0 Å3
d(Fe-oop): 0.179 Å
Not assigned.
3r1a-B-500
sad. +0.30
ruf. +0.16
dom. +0.14
bre. -0.24
CYS chainID: B,
resSeq: 436,
molecule: Cytochrome P450 2B4
oxidoreductase
oligomeric count: 1
pocket vol.: 418.0 Å3
d(Fe-oop): 0.129 Å
HOH chainID: B, resSeq: 2,
molecule: water
3r1a-C-500
sad. +0.02
ruf. -0.10
dom. +0.06
bre. -0.24
CYS chainID: C,
resSeq: 436,
molecule: Cytochrome P450 2B4
oxidoreductase
oligomeric count: 1
pocket vol.: 410.0 Å3
d(Fe-oop): 0.195 Å
Not assigned.
3r1a-E-500
sad. +0.09
ruf. -0.06
dom. +0.29
bre. -0.29
CYS chainID: E,
resSeq: 436,
molecule: Cytochrome P450 2B4
oxidoreductase
oligomeric count: 1
pocket vol.: 428.0 Å3
d(Fe-oop): 0.127 Å
HOH chainID: E, resSeq: 5,
molecule: water
3r1a-F-500
sad. -0.12
ruf. +0.15
dom. +0.47
bre. -0.24
CYS chainID: F,
resSeq: 436,
molecule: Cytochrome P450 2B4
oxidoreductase
oligomeric count: 1
pocket vol.: 409.0 Å3
d(Fe-oop): 0.101 Å
Not assigned.
3r1a-G-500
sad. -0.06
ruf. +0.43
dom. +0.15
bre. -0.20
CYS chainID: G,
resSeq: 436,
molecule: Cytochrome P450 2B4
oxidoreductase
oligomeric count: 1
pocket vol.: 423.0 Å3
d(Fe-oop): 0.114 Å
HOH chainID: G, resSeq: 7,
molecule: water
3r1a-H-500
sad. -0.02
ruf. -0.21
dom. +0.10
bre. -0.29
CYS chainID: H,
resSeq: 436,
molecule: Cytochrome P450 2B4
oxidoreductase
oligomeric count: 1
pocket vol.: 423.0 Å3
d(Fe-oop): 0.033 Å
Not assigned.