Browser

select function

select ligand

clear

→ advanced search

PyDISH No: 06774

PDB: 3p9p,
chainID: D, resSeq: 755
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 1.5 Å

axial ligand #1: TYR

chainID: D,
resSeq: 415,
Coordination distance[Å]: 2.168
molecule: Catalase HPII
EC number: 1.11.1.6
Organism: Escherichia coli

List of other hemes in pdb:3p9p

ID of heme	Distortion	Axial ligands on heme		Function & structure
3p9p-A-754	`sad. -0.20 ruf. -0.62 dom. +0.20 bre. -0.29`	TYR	chainID: A, resSeq: 415, molecule: Catalase HPII	oxidoreductase oligomeric count: 4 pocket vol.: 363.0 Å³ d(Fe-oop): 0.130 Å
3p9p-A-754	`sad. -0.20 ruf. -0.62 dom. +0.20 bre. -0.29`	HOH	chainID: A, resSeq: 2309, molecule: water
3p9p-A-755	`sad. -0.26 ruf. +0.29 dom. +0.28 bre. -0.15`	TYR	chainID: A, resSeq: 415, molecule: Catalase HPII	oxidoreductase oligomeric count: 4 pocket vol.: 360.0 Å³ d(Fe-oop): 0.102 Å
3p9p-A-755	`sad. -0.26 ruf. +0.29 dom. +0.28 bre. -0.15`	HOH	chainID: A, resSeq: 2309, molecule: water
3p9p-B-754	`sad. -0.16 ruf. -0.84 dom. +0.20 bre. -0.19`	TYR	chainID: B, resSeq: 415, molecule: Catalase HPII	oxidoreductase oligomeric count: 4 pocket vol.: 371.0 Å³ d(Fe-oop): 0.094 Å
3p9p-B-754	`sad. -0.16 ruf. -0.84 dom. +0.20 bre. -0.19`	HOH	chainID: B, resSeq: 3444, molecule: water
3p9p-B-755	`sad. -0.21 ruf. +0.32 dom. +0.25 bre. -0.13`	TYR	chainID: B, resSeq: 415, molecule: Catalase HPII	oxidoreductase oligomeric count: 4 pocket vol.: 368.0 Å³ d(Fe-oop): 0.086 Å
3p9p-B-755	`sad. -0.21 ruf. +0.32 dom. +0.25 bre. -0.13`	HOH	chainID: B, resSeq: 3444, molecule: water
3p9p-C-754	`sad. -0.09 ruf. -0.60 dom. +0.24 bre. -0.24`	TYR	chainID: C, resSeq: 415, molecule: Catalase HPII	oxidoreductase oligomeric count: 4 pocket vol.: 369.0 Å³ d(Fe-oop): 0.090 Å
3p9p-C-754	`sad. -0.09 ruf. -0.60 dom. +0.24 bre. -0.24`	HOH	chainID: C, resSeq: 3362, molecule: water
3p9p-C-755	`sad. -0.02 ruf. +0.19 dom. +0.22 bre. -0.14`	TYR	chainID: C, resSeq: 415, molecule: Catalase HPII	oxidoreductase oligomeric count: 4 pocket vol.: 377.0 Å³ d(Fe-oop): 0.084 Å
3p9p-C-755	`sad. -0.02 ruf. +0.19 dom. +0.22 bre. -0.14`	HOH	chainID: C, resSeq: 3362, molecule: water
3p9p-D-754	`sad. -0.13 ruf. -0.70 dom. +0.15 bre. -0.23`	TYR	chainID: D, resSeq: 415, molecule: Catalase HPII	oxidoreductase oligomeric count: 4 pocket vol.: 358.0 Å³ d(Fe-oop): 0.116 Å
3p9p-D-754	`sad. -0.13 ruf. -0.70 dom. +0.15 bre. -0.23`	Not assigned.