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PyDISH No: 06682

PDB: 3omn,
chainID: A, resSeq: 1
heme type: A

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.15 Å

axial ligand #1: HIS

chainID: A,
resSeq: 102,
Coordination distance[Å]: 2.031
molecule: Cytochrome c oxidase, aa3 type, subunit I
EC number: 1.9.3.1
Organism: Rhodobacter sphaeroides 2.4.1

axial ligand #2: HIS

chainID: A,
resSeq: 421,
Coordination distance[Å]: 2.072
molecule: same as ligand #1

List of other hemes in pdb:3omn

ID of heme Distortion Axial ligands on heme Function & structure
3omn-A-2
sad. -0.50
ruf. +0.52
dom. +0.58
bre. -0.30
HIS chainID: A,
resSeq: 419,
molecule: Cytochrome c oxidase, aa3 type, subunit I
oxidoreductase
oligomeric count: 2
pocket vol.: 713.0 Å3
d(Fe-oop): 0.335 Å
HOH chainID: A, resSeq: 701,
molecule: water
3omn-C-1
sad. -0.69
ruf. +0.34
dom. +0.27
bre. -0.21
HIS chainID: C,
resSeq: 102,
molecule: Cytochrome c oxidase, aa3 type, subunit I
oxidoreductase
oligomeric count: 2
pocket vol.: 549.0 Å3
d(Fe-oop): 0.028 Å
HIS chainID: C, resSeq: 421,
molecule: Cytochrome c oxidase, aa3 type, subunit I
3omn-C-2
sad. -0.42
ruf. +0.51
dom. +0.66
bre. -0.30
HIS chainID: C,
resSeq: 419,
molecule: Cytochrome c oxidase, aa3 type, subunit I
oxidoreductase
oligomeric count: 2
pocket vol.: 770.0 Å3
d(Fe-oop): 0.328 Å
HOH chainID: C, resSeq: 701,
molecule: water