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PyDISH No: 06678

PDB: 3omi,
chainID: A, resSeq: 607
heme type: A

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.15 Å

axial ligand #1: HIS

chainID: A,
resSeq: 102,
Coordination distance[Å]: 2.032
molecule: Cytochrome c oxidase, aa3 type, subunit I
EC number: 1.9.3.1
Organism: Rhodobacter sphaeroides 2.4.1

axial ligand #2: HIS

chainID: A,
resSeq: 421,
Coordination distance[Å]: 2.046
molecule: same as ligand #1

List of other hemes in pdb:3omi

ID of heme Distortion Axial ligands on heme Function & structure
3omi-A-608
sad. -0.29
ruf. +0.11
dom. +0.43
bre. -0.29
HIS chainID: A,
resSeq: 419,
molecule: Cytochrome c oxidase, aa3 type, subunit I
oxidoreductase
oligomeric count: 2
pocket vol.: 686.0 Å3
d(Fe-oop): 0.183 Å
HOH chainID: A, resSeq: 744,
molecule: water
3omi-C-605
sad. -0.69
ruf. +0.31
dom. +0.25
bre. -0.16
HIS chainID: C,
resSeq: 102,
molecule: Cytochrome c oxidase, aa3 type, subunit I
oxidoreductase
oligomeric count: 2
pocket vol.: 589.0 Å3
d(Fe-oop): 0.006 Å
HIS chainID: C, resSeq: 421,
molecule: Cytochrome c oxidase, aa3 type, subunit I
3omi-C-606
sad. -0.27
ruf. +0.07
dom. +0.52
bre. -0.33
HIS chainID: C,
resSeq: 419,
molecule: Cytochrome c oxidase, aa3 type, subunit I
oxidoreductase
oligomeric count: 2
pocket vol.: 701.0 Å3
d(Fe-oop): 0.153 Å
HOH chainID: C, resSeq: 795,
molecule: water