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PyDISH No: 06625

PDB: 3o5c,
chainID: A, resSeq: 401
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 1.8 Å

axial ligand #1: HIS

chainID: A,
resSeq: 64,
Coordination distance[Å]: 2.133
molecule: Cytochrome c551 peroxidase
Organism: Shewanella oneidensis

axial ligand #2: HOH

chainID: A,
resSeq: 1172,
Coordination distance[Å]: 2.441
molecule: water

List of other hemes in pdb:3o5c

ID of heme Distortion Axial ligands on heme Function & structure
3o5c-A-501
sad. +0.22
ruf. -0.96
dom. +0.49
bre. -0.17
HIS chainID: A,
resSeq: 208,
molecule: Cytochrome c551 peroxidase
electron transporter
oligomeric count: 2
pocket vol.: 350.0 Å3
d(Fe-oop): 0.005 Å
MET chainID: A, resSeq: 279,
molecule: Cytochrome c551 peroxidase
3o5c-B-402
sad. +0.75
ruf. -1.29
dom. +0.28
bre. -0.02
HIS chainID: B,
resSeq: 64,
molecule: Cytochrome c551 peroxidase
electron transporter
oligomeric count: 2
pocket vol.: 332.0 Å3
d(Fe-oop): 0.045 Å
HOH chainID: B, resSeq: 1225,
molecule: water
3o5c-B-502
sad. +0.30
ruf. -0.86
dom. +0.49
bre. -0.17
HIS chainID: B,
resSeq: 208,
molecule: Cytochrome c551 peroxidase
electron transporter
oligomeric count: 2
pocket vol.: 351.0 Å3
d(Fe-oop): 0.035 Å
MET chainID: B, resSeq: 279,
molecule: Cytochrome c551 peroxidase
3o5c-C-403
sad. +0.63
ruf. -1.12
dom. +0.24
bre. -0.04
HIS chainID: C,
resSeq: 64,
molecule: Cytochrome c551 peroxidase
electron transporter
oligomeric count: 2
pocket vol.: 329.0 Å3
d(Fe-oop): 0.040 Å
HOH chainID: C, resSeq: 1135,
molecule: water
3o5c-C-503
sad. +0.27
ruf. -0.77
dom. +0.49
bre. -0.10
HIS chainID: C,
resSeq: 208,
molecule: Cytochrome c551 peroxidase
electron transporter
oligomeric count: 2
pocket vol.: 347.0 Å3
d(Fe-oop): 0.018 Å
MET chainID: C, resSeq: 279,
molecule: Cytochrome c551 peroxidase
3o5c-D-404
sad. +0.74
ruf. -1.26
dom. +0.27
bre. -0.11
HIS chainID: D,
resSeq: 64,
molecule: Cytochrome c551 peroxidase
electron transporter
oligomeric count: 2
pocket vol.: 319.0 Å3
d(Fe-oop): 0.037 Å
HOH chainID: D, resSeq: 1140,
molecule: water
3o5c-D-504
sad. +0.25
ruf. -0.84
dom. +0.42
bre. -0.13
HIS chainID: D,
resSeq: 208,
molecule: Cytochrome c551 peroxidase
electron transporter
oligomeric count: 2
pocket vol.: 339.0 Å3
d(Fe-oop): 0.005 Å
MET chainID: D, resSeq: 279,
molecule: Cytochrome c551 peroxidase