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PyDISH No: 06610

PDB: 3nwv,
chainID: D, resSeq: 105
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 1.9 Å

axial ligand #1: HIS

chainID: D,
resSeq: 18,
Coordination distance[Å]: 1.96
molecule: Cytochrome c
Organism: Homo sapiens

axial ligand #2: MET

chainID: D,
resSeq: 80,
Coordination distance[Å]: 2.323
molecule: same as ligand #1

List of other hemes in pdb:3nwv

ID of heme Distortion Axial ligands on heme Function & structure
3nwv-A-105
sad. -0.27
ruf. -0.79
dom. -0.06
bre. -0.10
HIS chainID: A,
resSeq: 18,
molecule: Cytochrome c
electron transporter
oligomeric count: 1
pocket vol.: 356.0 Å3
d(Fe-oop): 0.000 Å
MET chainID: A, resSeq: 80,
molecule: Cytochrome c
3nwv-B-105
sad. -0.28
ruf. -0.76
dom. -0.07
bre. -0.23
HIS chainID: B,
resSeq: 18,
molecule: Cytochrome c
electron transporter
oligomeric count: 1
pocket vol.: 318.0 Å3
d(Fe-oop): 0.001 Å
MET chainID: B, resSeq: 80,
molecule: Cytochrome c
3nwv-C-105
sad. -0.28
ruf. -0.96
dom. +0.03
bre. -0.15
HIS chainID: C,
resSeq: 18,
molecule: Cytochrome c
electron transporter
oligomeric count: 1
pocket vol.: 301.0 Å3
d(Fe-oop): 0.017 Å
MET chainID: C, resSeq: 80,
molecule: Cytochrome c