Browser

PyDISH No: 06553

PDB: 3nn2,
chainID: D, resSeq: 239
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 1.94 Å

axial ligand #1: HIS

chainID: D,
resSeq: 160,
Coordination distance[Å]: 2.175
molecule: Chlorite dismutase
EC number: 1.13.11.49
Organism: Candidatus Nitrospira defluvii

axial ligand #2: CYN

chainID: D,
resSeq: 244,
Coordination distance[Å]: 1.924
molecule: CYANIDE ION

List of other hemes in pdb:3nn2

ID of heme Distortion Axial ligands on heme Function & structure
3nn2-A-239
sad. -0.42
ruf. +0.36
dom. -0.13
bre. -0.07
HIS chainID: A,
resSeq: 160,
molecule: Chlorite dismutase
oxidoreductase
oligomeric count: 5
pocket vol.: 442.0 Å3
d(Fe-oop): 0.006 Å
CYN chainID: A, resSeq: 245,
molecule: CYANIDE ION
3nn2-B-239
sad. -0.43
ruf. +0.57
dom. -0.11
bre. -0.10
HIS chainID: B,
resSeq: 160,
molecule: Chlorite dismutase
oxidoreductase
oligomeric count: 5
pocket vol.: 440.0 Å3
d(Fe-oop): 0.033 Å
CYN chainID: B, resSeq: 244,
molecule: CYANIDE ION
3nn2-C-239
sad. -0.43
ruf. +0.30
dom. -0.11
bre. -0.07
HIS chainID: C,
resSeq: 160,
molecule: Chlorite dismutase
oxidoreductase
oligomeric count: 5
pocket vol.: 444.0 Å3
d(Fe-oop): 0.022 Å
CYN chainID: C, resSeq: 243,
molecule: CYANIDE ION
3nn2-E-239
sad. -0.44
ruf. +0.42
dom. -0.12
bre. +0.01
HIS chainID: E,
resSeq: 160,
molecule: Chlorite dismutase
oxidoreductase
oligomeric count: 5
pocket vol.: 432.0 Å3
d(Fe-oop): 0.035 Å
CYN chainID: E, resSeq: 242,
molecule: CYANIDE ION