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Protein data
function: oxidoreductaseexperiment: X-RAY DIFFRACTION
resolution: 1.55 Å
axial ligand #1: LYS
chainID: B,resSeq: 188,
Coordination distance[Å]: 1.96
molecule: Eight-heme nitrite reductase
Organism: Thioalkalivibrio nitratireducens
axial ligand #2: CYN
chainID: B,resSeq: 526,
Coordination distance[Å]: 1.912
molecule: CYANIDE ION
List of other hemes in pdb:3mmo
| ID of heme | Distortion | Axial ligands on heme | Function & structure | |
|---|---|---|---|---|
3mmo-A-1004 |
sad. +0.54 ruf. -0.52 dom. +0.09 bre. -0.10 |
LYS | chainID: A, resSeq: 188, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 416.0 Å3 d(Fe-oop): 0.017 Å |
| CYN | chainID: A, resSeq: 526, molecule: CYANIDE ION |
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3mmo-A-1005 |
sad. +1.12 ruf. -0.32 dom. -0.02 bre. -0.05 |
HIS | chainID: A, resSeq: 231, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 495.0 Å3 d(Fe-oop): 0.016 Å |
| HIS | chainID: A, resSeq: 398, molecule: Eight-heme nitrite reductase |
|||
3mmo-A-1006 |
sad. -0.21 ruf. -0.75 dom. +0.20 bre. -0.09 |
HIS | chainID: A, resSeq: 119, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 428.0 Å3 d(Fe-oop): 0.007 Å |
| HIS | chainID: A, resSeq: 300, molecule: Eight-heme nitrite reductase |
|||
3mmo-A-1007 |
sad. +0.75 ruf. -0.69 dom. -0.10 bre. -0.06 |
HIS | chainID: A, resSeq: 383, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 487.0 Å3 d(Fe-oop): 0.027 Å |
| HIS | chainID: A, resSeq: 491, molecule: Eight-heme nitrite reductase |
|||
3mmo-A-1008 |
sad. -0.36 ruf. -0.78 dom. +0.12 bre. -0.07 |
HIS | chainID: A, resSeq: 372, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 548.0 Å3 d(Fe-oop): 0.027 Å |
| HIS | chainID: A, resSeq: 415, molecule: Eight-heme nitrite reductase |
|||
3mmo-A-1002 |
sad. -0.13 ruf. -0.45 dom. -0.01 bre. -0.10 |
HIS | chainID: A, resSeq: 39, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 388.0 Å3 d(Fe-oop): 0.018 Å |
| HIS | chainID: A, resSeq: 234, molecule: Eight-heme nitrite reductase |
|||
3mmo-A-1003 |
sad. +0.39 ruf. -0.54 dom. +0.02 bre. -0.10 |
HIS | chainID: A, resSeq: 30, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 525.0 Å3 d(Fe-oop): 0.034 Å |
| HIS | chainID: A, resSeq: 70, molecule: Eight-heme nitrite reductase |
|||
3mmo-A-1001 |
sad. +0.07 ruf. -0.34 dom. -0.07 bre. -0.19 |
HIS | chainID: A, resSeq: 18, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 462.0 Å3 d(Fe-oop): 0.035 Å |
| HIS | chainID: A, resSeq: 44, molecule: Eight-heme nitrite reductase |
|||
3mmo-B-1005 |
sad. +1.15 ruf. -0.32 dom. -0.01 bre. -0.03 |
HIS | chainID: B, resSeq: 231, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 508.0 Å3 d(Fe-oop): 0.024 Å |
| HIS | chainID: B, resSeq: 398, molecule: Eight-heme nitrite reductase |
|||
3mmo-B-1006 |
sad. -0.21 ruf. -0.77 dom. +0.20 bre. -0.09 |
HIS | chainID: B, resSeq: 119, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 413.0 Å3 d(Fe-oop): 0.009 Å |
| HIS | chainID: B, resSeq: 300, molecule: Eight-heme nitrite reductase |
|||
3mmo-B-1007 |
sad. +0.79 ruf. -0.67 dom. -0.12 bre. -0.05 |
HIS | chainID: B, resSeq: 383, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 443.0 Å3 d(Fe-oop): 0.028 Å |
| HIS | chainID: B, resSeq: 491, molecule: Eight-heme nitrite reductase |
|||
3mmo-B-1008 |
sad. -0.35 ruf. -0.78 dom. +0.11 bre. -0.06 |
HIS | chainID: B, resSeq: 372, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 565.0 Å3 d(Fe-oop): 0.017 Å |
| HIS | chainID: B, resSeq: 415, molecule: Eight-heme nitrite reductase |
|||
3mmo-B-1002 |
sad. -0.11 ruf. -0.43 dom. -0.01 bre. -0.13 |
HIS | chainID: B, resSeq: 39, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 364.0 Å3 d(Fe-oop): 0.033 Å |
| HIS | chainID: B, resSeq: 234, molecule: Eight-heme nitrite reductase |
|||
3mmo-B-1003 |
sad. +0.35 ruf. -0.51 dom. +0.00 bre. -0.09 |
HIS | chainID: B, resSeq: 30, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 508.0 Å3 d(Fe-oop): 0.016 Å |
| HIS | chainID: B, resSeq: 70, molecule: Eight-heme nitrite reductase |
|||
3mmo-B-1001 |
sad. -0.14 ruf. -0.27 dom. -0.08 bre. -0.17 |
HIS | chainID: B, resSeq: 18, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 428.0 Å3 d(Fe-oop): 0.025 Å |
| HIS | chainID: B, resSeq: 44, molecule: Eight-heme nitrite reductase |
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