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PyDISH No: 06331

PDB: 3mmo,
chainID: A, resSeq: 1005
heme type: C

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 1.55 Å

axial ligand #1: HIS

chainID: A,
resSeq: 231,
Coordination distance[Å]: 1.982
molecule: Eight-heme nitrite reductase
Organism: Thioalkalivibrio nitratireducens

axial ligand #2: HIS

chainID: A,
resSeq: 398,
Coordination distance[Å]: 1.997
molecule: same as ligand #1

List of other hemes in pdb:3mmo

ID of heme	Distortion	Axial ligands on heme		Function & structure
3mmo-A-1004	`sad. +0.54 ruf. -0.52 dom. +0.09 bre. -0.10`	LYS	chainID: A, resSeq: 188, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 416.0 Å³ d(Fe-oop): 0.017 Å
3mmo-A-1004	`sad. +0.54 ruf. -0.52 dom. +0.09 bre. -0.10`	CYN	chainID: A, resSeq: 526, molecule: CYANIDE ION
3mmo-A-1006	`sad. -0.21 ruf. -0.75 dom. +0.20 bre. -0.09`	HIS	chainID: A, resSeq: 119, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 428.0 Å³ d(Fe-oop): 0.007 Å
3mmo-A-1006	`sad. -0.21 ruf. -0.75 dom. +0.20 bre. -0.09`	HIS	chainID: A, resSeq: 300, molecule: Eight-heme nitrite reductase
3mmo-A-1007	`sad. +0.75 ruf. -0.69 dom. -0.10 bre. -0.06`	HIS	chainID: A, resSeq: 383, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 487.0 Å³ d(Fe-oop): 0.027 Å
3mmo-A-1007	`sad. +0.75 ruf. -0.69 dom. -0.10 bre. -0.06`	HIS	chainID: A, resSeq: 491, molecule: Eight-heme nitrite reductase
3mmo-A-1008	`sad. -0.36 ruf. -0.78 dom. +0.12 bre. -0.07`	HIS	chainID: A, resSeq: 372, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 548.0 Å³ d(Fe-oop): 0.027 Å
3mmo-A-1008	`sad. -0.36 ruf. -0.78 dom. +0.12 bre. -0.07`	HIS	chainID: A, resSeq: 415, molecule: Eight-heme nitrite reductase
3mmo-A-1002	`sad. -0.13 ruf. -0.45 dom. -0.01 bre. -0.10`	HIS	chainID: A, resSeq: 39, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 388.0 Å³ d(Fe-oop): 0.018 Å
3mmo-A-1002	`sad. -0.13 ruf. -0.45 dom. -0.01 bre. -0.10`	HIS	chainID: A, resSeq: 234, molecule: Eight-heme nitrite reductase
3mmo-A-1003	`sad. +0.39 ruf. -0.54 dom. +0.02 bre. -0.10`	HIS	chainID: A, resSeq: 30, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 525.0 Å³ d(Fe-oop): 0.034 Å
3mmo-A-1003	`sad. +0.39 ruf. -0.54 dom. +0.02 bre. -0.10`	HIS	chainID: A, resSeq: 70, molecule: Eight-heme nitrite reductase
3mmo-A-1001	`sad. +0.07 ruf. -0.34 dom. -0.07 bre. -0.19`	HIS	chainID: A, resSeq: 18, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 462.0 Å³ d(Fe-oop): 0.035 Å
3mmo-A-1001	`sad. +0.07 ruf. -0.34 dom. -0.07 bre. -0.19`	HIS	chainID: A, resSeq: 44, molecule: Eight-heme nitrite reductase
3mmo-B-1004	`sad. +0.57 ruf. -0.50 dom. +0.09 bre. -0.13`	LYS	chainID: B, resSeq: 188, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 401.0 Å³ d(Fe-oop): 0.022 Å
3mmo-B-1004	`sad. +0.57 ruf. -0.50 dom. +0.09 bre. -0.13`	CYN	chainID: B, resSeq: 526, molecule: CYANIDE ION
3mmo-B-1005	`sad. +1.15 ruf. -0.32 dom. -0.01 bre. -0.03`	HIS	chainID: B, resSeq: 231, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 508.0 Å³ d(Fe-oop): 0.024 Å
3mmo-B-1005	`sad. +1.15 ruf. -0.32 dom. -0.01 bre. -0.03`	HIS	chainID: B, resSeq: 398, molecule: Eight-heme nitrite reductase
3mmo-B-1006	`sad. -0.21 ruf. -0.77 dom. +0.20 bre. -0.09`	HIS	chainID: B, resSeq: 119, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 413.0 Å³ d(Fe-oop): 0.009 Å
3mmo-B-1006	`sad. -0.21 ruf. -0.77 dom. +0.20 bre. -0.09`	HIS	chainID: B, resSeq: 300, molecule: Eight-heme nitrite reductase
3mmo-B-1007	`sad. +0.79 ruf. -0.67 dom. -0.12 bre. -0.05`	HIS	chainID: B, resSeq: 383, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 443.0 Å³ d(Fe-oop): 0.028 Å
3mmo-B-1007	`sad. +0.79 ruf. -0.67 dom. -0.12 bre. -0.05`	HIS	chainID: B, resSeq: 491, molecule: Eight-heme nitrite reductase
3mmo-B-1008	`sad. -0.35 ruf. -0.78 dom. +0.11 bre. -0.06`	HIS	chainID: B, resSeq: 372, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 565.0 Å³ d(Fe-oop): 0.017 Å
3mmo-B-1008	`sad. -0.35 ruf. -0.78 dom. +0.11 bre. -0.06`	HIS	chainID: B, resSeq: 415, molecule: Eight-heme nitrite reductase
3mmo-B-1002	`sad. -0.11 ruf. -0.43 dom. -0.01 bre. -0.13`	HIS	chainID: B, resSeq: 39, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 364.0 Å³ d(Fe-oop): 0.033 Å
3mmo-B-1002	`sad. -0.11 ruf. -0.43 dom. -0.01 bre. -0.13`	HIS	chainID: B, resSeq: 234, molecule: Eight-heme nitrite reductase
3mmo-B-1003	`sad. +0.35 ruf. -0.51 dom. +0.00 bre. -0.09`	HIS	chainID: B, resSeq: 30, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 508.0 Å³ d(Fe-oop): 0.016 Å
3mmo-B-1003	`sad. +0.35 ruf. -0.51 dom. +0.00 bre. -0.09`	HIS	chainID: B, resSeq: 70, molecule: Eight-heme nitrite reductase
3mmo-B-1001	`sad. -0.14 ruf. -0.27 dom. -0.08 bre. -0.17`	HIS	chainID: B, resSeq: 18, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 428.0 Å³ d(Fe-oop): 0.025 Å
3mmo-B-1001	`sad. -0.14 ruf. -0.27 dom. -0.08 bre. -0.17`	HIS	chainID: B, resSeq: 44, molecule: Eight-heme nitrite reductase