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PyDISH No: 06176

PDB: 3lg1,
chainID: A, resSeq: 1002
heme type: C

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 1.95 Å

axial ligand #1: HIS

chainID: A,
resSeq: 39,
Coordination distance[Å]: 1.901
molecule: Eight-heme nitrite reductase
Organism: Thioalkalivibrio nitratireducens

axial ligand #2: HIS

chainID: A,
resSeq: 234,
Coordination distance[Å]: 1.887
molecule: same as ligand #1

List of other hemes in pdb:3lg1

ID of heme	Distortion	Axial ligands on heme		Function & structure
3lg1-A-1004	`sad. +0.60 ruf. -0.33 dom. +0.11 bre. -0.13`	LYS	chainID: A, resSeq: 188, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 411.0 Å³ d(Fe-oop): 0.043 Å
3lg1-A-1004	`sad. +0.60 ruf. -0.33 dom. +0.11 bre. -0.13`	HOH	chainID: A, resSeq: 940, molecule: water
3lg1-A-1005	`sad. +1.17 ruf. -0.23 dom. +0.00 bre. -0.00`	HIS	chainID: A, resSeq: 231, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 478.0 Å³ d(Fe-oop): 0.045 Å
3lg1-A-1005	`sad. +1.17 ruf. -0.23 dom. +0.00 bre. -0.00`	HIS	chainID: A, resSeq: 398, molecule: Eight-heme nitrite reductase
3lg1-A-1006	`sad. -0.18 ruf. -0.71 dom. +0.25 bre. -0.17`	HIS	chainID: A, resSeq: 119, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 429.0 Å³ d(Fe-oop): 0.001 Å
3lg1-A-1006	`sad. -0.18 ruf. -0.71 dom. +0.25 bre. -0.17`	HIS	chainID: A, resSeq: 300, molecule: Eight-heme nitrite reductase
3lg1-A-1007	`sad. +0.80 ruf. -0.61 dom. -0.04 bre. -0.07`	HIS	chainID: A, resSeq: 383, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 445.0 Å³ d(Fe-oop): 0.052 Å
3lg1-A-1007	`sad. +0.80 ruf. -0.61 dom. -0.04 bre. -0.07`	HIS	chainID: A, resSeq: 491, molecule: Eight-heme nitrite reductase
3lg1-A-1008	`sad. -0.38 ruf. -0.63 dom. +0.15 bre. -0.19`	HIS	chainID: A, resSeq: 372, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 548.0 Å³ d(Fe-oop): 0.024 Å
3lg1-A-1008	`sad. -0.38 ruf. -0.63 dom. +0.15 bre. -0.19`	HIS	chainID: A, resSeq: 415, molecule: Eight-heme nitrite reductase
3lg1-A-1003	`sad. +0.39 ruf. -0.51 dom. +0.07 bre. -0.02`	HIS	chainID: A, resSeq: 30, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 517.0 Å³ d(Fe-oop): 0.061 Å
3lg1-A-1003	`sad. +0.39 ruf. -0.51 dom. +0.07 bre. -0.02`	HIS	chainID: A, resSeq: 70, molecule: Eight-heme nitrite reductase
3lg1-A-1001	`sad. +0.02 ruf. -0.28 dom. -0.09 bre. -0.32`	HIS	chainID: A, resSeq: 18, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 453.0 Å³ d(Fe-oop): 0.012 Å
3lg1-A-1001	`sad. +0.02 ruf. -0.28 dom. -0.09 bre. -0.32`	HIS	chainID: A, resSeq: 44, molecule: Eight-heme nitrite reductase
3lg1-B-1004	`sad. +0.51 ruf. -0.42 dom. +0.13 bre. -0.16`	LYS	chainID: B, resSeq: 188, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 411.0 Å³ d(Fe-oop): 0.058 Å
3lg1-B-1004	`sad. +0.51 ruf. -0.42 dom. +0.13 bre. -0.16`	HOH	chainID: B, resSeq: 955, molecule: water
3lg1-B-1005	`sad. +1.18 ruf. -0.27 dom. -0.00 bre. -0.02`	HIS	chainID: B, resSeq: 231, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 473.0 Å³ d(Fe-oop): 0.051 Å
3lg1-B-1005	`sad. +1.18 ruf. -0.27 dom. -0.00 bre. -0.02`	HIS	chainID: B, resSeq: 398, molecule: Eight-heme nitrite reductase
3lg1-B-1006	`sad. -0.20 ruf. -0.73 dom. +0.28 bre. -0.13`	HIS	chainID: B, resSeq: 119, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 413.0 Å³ d(Fe-oop): 0.017 Å
3lg1-B-1006	`sad. -0.20 ruf. -0.73 dom. +0.28 bre. -0.13`	HIS	chainID: B, resSeq: 300, molecule: Eight-heme nitrite reductase
3lg1-B-1007	`sad. +0.77 ruf. -0.56 dom. -0.06 bre. -0.04`	HIS	chainID: B, resSeq: 383, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 426.0 Å³ d(Fe-oop): 0.036 Å
3lg1-B-1007	`sad. +0.77 ruf. -0.56 dom. -0.06 bre. -0.04`	HIS	chainID: B, resSeq: 491, molecule: Eight-heme nitrite reductase
3lg1-B-1008	`sad. -0.40 ruf. -0.70 dom. +0.16 bre. -0.13`	HIS	chainID: B, resSeq: 372, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 571.0 Å³ d(Fe-oop): 0.043 Å
3lg1-B-1008	`sad. -0.40 ruf. -0.70 dom. +0.16 bre. -0.13`	HIS	chainID: B, resSeq: 415, molecule: Eight-heme nitrite reductase
3lg1-B-1002	`sad. -0.05 ruf. -0.44 dom. +0.02 bre. -0.29`	HIS	chainID: B, resSeq: 39, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 353.0 Å³ d(Fe-oop): 0.034 Å
3lg1-B-1002	`sad. -0.05 ruf. -0.44 dom. +0.02 bre. -0.29`	HIS	chainID: B, resSeq: 234, molecule: Eight-heme nitrite reductase
3lg1-B-1003	`sad. +0.41 ruf. -0.37 dom. +0.04 bre. +0.02`	HIS	chainID: B, resSeq: 30, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 532.0 Å³ d(Fe-oop): 0.054 Å
3lg1-B-1003	`sad. +0.41 ruf. -0.37 dom. +0.04 bre. +0.02`	HIS	chainID: B, resSeq: 70, molecule: Eight-heme nitrite reductase
3lg1-B-1001	`sad. -0.15 ruf. -0.23 dom. -0.11 bre. -0.36`	HIS	chainID: B, resSeq: 18, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 386.0 Å³ d(Fe-oop): 0.039 Å
3lg1-B-1001	`sad. -0.15 ruf. -0.23 dom. -0.11 bre. -0.36`	HIS	chainID: B, resSeq: 44, molecule: Eight-heme nitrite reductase