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PyDISH No: 06145

PDB: 3l74,
chainID: Q, resSeq: 501
heme type: C

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.76 Å

axial ligand #1: HIS

chainID: Q,
resSeq: 41,
Coordination distance[Å]: 2.002
molecule: MITOCHONDRIAL CYTOCHROME C1, HEME PROTEIN
EC number: 1.10.2.2
Organism: GALLUS GALLUS

axial ligand #2: MET

chainID: Q,
resSeq: 160,
Coordination distance[Å]: 2.191
molecule: same as ligand #1

List of other hemes in pdb:3l74

ID of heme Distortion Axial ligands on heme Function & structure
3l74-C-501
sad. +0.23
ruf. -0.12
dom. -0.11
bre. +0.03
HIS chainID: C,
resSeq: 84,
molecule: CYTOCHROME B
oxidoreductase
oligomeric count: 20
pocket vol.: 396.0 Å3
d(Fe-oop): 0.054 Å
HIS chainID: C, resSeq: 183,
molecule: CYTOCHROME B
3l74-C-502
sad. -0.62
ruf. -0.59
dom. +0.18
bre. +0.09
HIS chainID: C,
resSeq: 98,
molecule: CYTOCHROME B
oxidoreductase
oligomeric count: 20
pocket vol.: 368.0 Å3
d(Fe-oop): 0.049 Å
HIS chainID: C, resSeq: 197,
molecule: CYTOCHROME B
3l74-D-501
sad. -0.01
ruf. -0.24
dom. -0.07
bre. +0.09
HIS chainID: D,
resSeq: 41,
molecule: MITOCHONDRIAL CYTOCHROME C1, HEME PROTEIN
oxidoreductase
oligomeric count: 20
pocket vol.: 428.0 Å3
d(Fe-oop): 0.023 Å
MET chainID: D, resSeq: 160,
molecule: MITOCHONDRIAL CYTOCHROME C1, HEME PROTEIN
3l74-P-501
sad. +0.31
ruf. -0.24
dom. -0.14
bre. +0.02
HIS chainID: P,
resSeq: 84,
molecule: CYTOCHROME B
oxidoreductase
oligomeric count: 20
pocket vol.: 423.0 Å3
d(Fe-oop): 0.022 Å
HIS chainID: P, resSeq: 183,
molecule: CYTOCHROME B
3l74-P-502
sad. -0.69
ruf. -0.58
dom. +0.17
bre. +0.08
HIS chainID: P,
resSeq: 98,
molecule: CYTOCHROME B
oxidoreductase
oligomeric count: 20
pocket vol.: 371.0 Å3
d(Fe-oop): 0.062 Å
HIS chainID: P, resSeq: 197,
molecule: CYTOCHROME B