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PyDISH No: 06049

PDB: 3k9v,
chainID: A, resSeq: 520
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.5 Å
origomeric count: 1

axial ligand #1: CYS

chainID: A,
resSeq: 462,
Coordination distance[Å]: 2.36
molecule: 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial
EC number: 1.14.13.-
Organism: Rattus norvegicus

axial ligand #2: HOH

chainID: A,
resSeq: 4,
Coordination distance[Å]: 2.839
molecule: water

List of other hemes in pdb:3k9v

ID of heme Distortion Axial ligands on heme Function & structure
3k9v-B-520
sad. -0.52
ruf. -0.08
dom. +0.03
bre. -0.14
CYS chainID: B,
resSeq: 462,
molecule: 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial
oxidoreductase
oligomeric count: 1
pocket vol.: 408.0 Å3
d(Fe-oop): 0.226 Å
Not assigned.