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PyDISH No: 05889

PDB: 3i8r,
chainID: B, resSeq: 902
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 1.5 Å

axial ligand #1: HIS

chainID: B,
resSeq: 320,
Coordination distance[Å]: 2.066
molecule: Heme oxygenase
Organism: Corynebacterium diphtheriae

axial ligand #2: DTV

chainID: B,
resSeq: 2002,
Coordination distance[Å]: 2.259
molecule: (2S,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL

List of other hemes in pdb:3i8r

ID of heme Distortion Axial ligands on heme Function & structure
3i8r-A-901
sad. -0.13
ruf. +0.59
dom. -0.15
bre. -0.16
HIS chainID: A,
resSeq: 20,
molecule: Heme oxygenase
oxidoreductase
oligomeric count: 1
pocket vol.: 582.0 Å3
d(Fe-oop): 0.032 Å
DTV chainID: A, resSeq: 2001,
molecule: (2S,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL
3i8r-C-903
sad. +0.05
ruf. +0.59
dom. +0.10
bre. -0.03
HIS chainID: C,
resSeq: 620,
molecule: Heme oxygenase
oxidoreductase
oligomeric count: 1
pocket vol.: 563.0 Å3
d(Fe-oop): 0.081 Å
DTV chainID: C, resSeq: 2003,
molecule: (2S,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL