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PyDISH No: 05791

PDB: 3h1l,
chainID: C, resSeq: 501
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 3.21 Å

axial ligand #1: HIS

chainID: C,
resSeq: 84,
Coordination distance[Å]: 2.003
molecule: Cytochrome b
EC number: 1.10.2.2
Organism: Gallus gallus

axial ligand #2: HIS

chainID: C,
resSeq: 183,
Coordination distance[Å]: 2.006
molecule: same as ligand #1

List of other hemes in pdb:3h1l

ID of heme Distortion Axial ligands on heme Function & structure
3h1l-C-502
sad. -0.61
ruf. -0.30
dom. +0.14
bre. +0.21
HIS chainID: C,
resSeq: 98,
molecule: Cytochrome b
oxidoreductase
oligomeric count: 20
pocket vol.: 400.0 Å3
d(Fe-oop): 0.006 Å
HIS chainID: C, resSeq: 197,
molecule: Cytochrome b
3h1l-D-501
sad. +0.20
ruf. -0.24
dom. -0.02
bre. +0.20
HIS chainID: D,
resSeq: 41,
molecule: MITOCHONDRIAL CYTOCHROME C1, HEME PROTEIN
oxidoreductase
oligomeric count: 20
pocket vol.: 439.0 Å3
d(Fe-oop): 0.009 Å
MET chainID: D, resSeq: 160,
molecule: MITOCHONDRIAL CYTOCHROME C1, HEME PROTEIN
3h1l-P-501
sad. +0.32
ruf. -0.28
dom. -0.20
bre. +0.14
HIS chainID: P,
resSeq: 84,
molecule: Cytochrome b
oxidoreductase
oligomeric count: 20
pocket vol.: 409.0 Å3
d(Fe-oop): 0.033 Å
HIS chainID: P, resSeq: 183,
molecule: Cytochrome b
3h1l-P-502
sad. -0.71
ruf. -0.11
dom. +0.13
bre. +0.15
HIS chainID: P,
resSeq: 98,
molecule: Cytochrome b
oxidoreductase
oligomeric count: 20
pocket vol.: 397.0 Å3
d(Fe-oop): 0.017 Å
HIS chainID: P, resSeq: 197,
molecule: Cytochrome b
3h1l-Q-501
sad. +0.05
ruf. -0.12
dom. -0.06
bre. +0.16
HIS chainID: Q,
resSeq: 41,
molecule: MITOCHONDRIAL CYTOCHROME C1, HEME PROTEIN
oxidoreductase
oligomeric count: 20
pocket vol.: 458.0 Å3
d(Fe-oop): 0.005 Å
MET chainID: Q, resSeq: 160,
molecule: MITOCHONDRIAL CYTOCHROME C1, HEME PROTEIN