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PyDISH No: 05780

PDB: 3h1j,
chainID: C, resSeq: 502
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 3.0 Å

axial ligand #1: HIS

chainID: C,
resSeq: 98,
Coordination distance[Å]: 2.01
molecule: Cytochrome b
EC number: 1.10.2.2
Organism: Gallus gallus

axial ligand #2: HIS

chainID: C,
resSeq: 197,
Coordination distance[Å]: 2.004
molecule: same as ligand #1

List of other hemes in pdb:3h1j

ID of heme Distortion Axial ligands on heme Function & structure
3h1j-C-501
sad. +0.18
ruf. -0.23
dom. -0.17
bre. +0.11
HIS chainID: C,
resSeq: 84,
molecule: Cytochrome b
oxidoreductase
oligomeric count: 20
pocket vol.: 383.0 Å3
d(Fe-oop): 0.000 Å
HIS chainID: C, resSeq: 183,
molecule: Cytochrome b
3h1j-D-501
sad. +0.10
ruf. -0.45
dom. -0.13
bre. +0.04
HIS chainID: D,
resSeq: 41,
molecule: MITOCHONDRIAL CYTOCHROME C1, HEME PROTEIN
oxidoreductase
oligomeric count: 20
pocket vol.: 419.0 Å3
d(Fe-oop): 0.028 Å
MET chainID: D, resSeq: 160,
molecule: MITOCHONDRIAL CYTOCHROME C1, HEME PROTEIN
3h1j-P-501
sad. +0.31
ruf. -0.04
dom. -0.15
bre. +0.09
HIS chainID: P,
resSeq: 84,
molecule: Cytochrome b
oxidoreductase
oligomeric count: 20
pocket vol.: 378.0 Å3
d(Fe-oop): 0.032 Å
HIS chainID: P, resSeq: 183,
molecule: Cytochrome b
3h1j-P-502
sad. -0.67
ruf. -0.19
dom. +0.29
bre. +0.06
HIS chainID: P,
resSeq: 98,
molecule: Cytochrome b
oxidoreductase
oligomeric count: 20
pocket vol.: 353.0 Å3
d(Fe-oop): 0.033 Å
HIS chainID: P, resSeq: 197,
molecule: Cytochrome b
3h1j-Q-501
sad. +0.01
ruf. -0.30
dom. -0.13
bre. +0.03
HIS chainID: Q,
resSeq: 41,
molecule: MITOCHONDRIAL CYTOCHROME C1, HEME PROTEIN
oxidoreductase
oligomeric count: 20
pocket vol.: 441.0 Å3
d(Fe-oop): 0.007 Å
MET chainID: Q, resSeq: 160,
molecule: MITOCHONDRIAL CYTOCHROME C1, HEME PROTEIN