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PyDISH No: 05652

PDB: 3fyi,
chainID: C, resSeq: 567
heme type: A

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.2 Å

axial ligand #1: HIS

chainID: C,
resSeq: 102,
Coordination distance[Å]: 2.11
molecule: Cytochrome c oxidase subunit 1
EC number: 1.9.3.1
Organism: Rhodobacter sphaeroides

axial ligand #2: HIS

chainID: C,
resSeq: 421,
Coordination distance[Å]: 2.066
molecule: same as ligand #1

List of other hemes in pdb:3fyi

ID of heme	Distortion	Axial ligands on heme		Function & structure
3fyi-A-567	`sad. -0.63 ruf. +0.33 dom. +0.14 bre. +0.04`	HIS	chainID: A, resSeq: 102, molecule: Cytochrome c oxidase subunit 1	oxidoreductase oligomeric count: 2 pocket vol.: 588.0 Å³ d(Fe-oop): 0.024 Å
3fyi-A-567	`sad. -0.63 ruf. +0.33 dom. +0.14 bre. +0.04`	HIS	chainID: A, resSeq: 421, molecule: Cytochrome c oxidase subunit 1
3fyi-A-568	`sad. -0.54 ruf. +0.44 dom. +0.49 bre. -0.43`	HIS	chainID: A, resSeq: 419, molecule: Cytochrome c oxidase subunit 1	oxidoreductase oligomeric count: 2 pocket vol.: 687.0 Å³ d(Fe-oop): 0.005 Å
3fyi-A-568	`sad. -0.54 ruf. +0.44 dom. +0.49 bre. -0.43`	CYN	chainID: A, resSeq: 572, molecule: CYANIDE ION
3fyi-C-568	`sad. -0.57 ruf. +0.53 dom. +0.53 bre. -0.44`	HIS	chainID: C, resSeq: 419, molecule: Cytochrome c oxidase subunit 1	oxidoreductase oligomeric count: 2 pocket vol.: 726.0 Å³ d(Fe-oop): 0.057 Å
3fyi-C-568	`sad. -0.57 ruf. +0.53 dom. +0.53 bre. -0.44`	CYN	chainID: C, resSeq: 572, molecule: CYANIDE ION