Browser

PyDISH No: 05646

PDB: 3fye,
chainID: A, resSeq: 567
heme type: A

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.15 Å

axial ligand #1: HIS

chainID: A,
resSeq: 102,
Coordination distance[Å]: 1.993
molecule: Cytochrome C oxidase subunit 1
EC number: 1.9.3.1
Organism: Rhodobacter sphaeroides

axial ligand #2: HIS

chainID: A,
resSeq: 421,
Coordination distance[Å]: 2.064
molecule: same as ligand #1

List of other hemes in pdb:3fye

ID of heme Distortion Axial ligands on heme Function & structure
3fye-A-568
sad. -0.49
ruf. +0.40
dom. +0.55
bre. -0.28
HIS chainID: A,
resSeq: 419,
molecule: Cytochrome C oxidase subunit 1
oxidoreductase
oligomeric count: 2
pocket vol.: 688.0 Å3
d(Fe-oop): 0.411 Å
Not assigned.
3fye-C-567
sad. -0.68
ruf. +0.38
dom. +0.18
bre. +0.06
HIS chainID: C,
resSeq: 102,
molecule: Cytochrome C oxidase subunit 1
oxidoreductase
oligomeric count: 2
pocket vol.: 590.0 Å3
d(Fe-oop): 0.001 Å
HIS chainID: C, resSeq: 421,
molecule: Cytochrome C oxidase subunit 1
3fye-C-568
sad. -0.61
ruf. +0.43
dom. +0.58
bre. -0.34
HIS chainID: C,
resSeq: 419,
molecule: Cytochrome C oxidase subunit 1
oxidoreductase
oligomeric count: 2
pocket vol.: 714.0 Å3
d(Fe-oop): 0.370 Å
Not assigned.