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PyDISH No: 05607

PDB: 3fo3,
chainID: A, resSeq: 1005
heme type: C

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 1.4 Å

axial ligand #1: HIS

chainID: A,
resSeq: 231,
Coordination distance[Å]: 1.983
molecule: Eight-heme nitrite reductase
Organism: Thioalkalivibrio nitratireducens

axial ligand #2: HIS

chainID: A,
resSeq: 398,
Coordination distance[Å]: 1.981
molecule: same as ligand #1

List of other hemes in pdb:3fo3

ID of heme	Distortion	Axial ligands on heme		Function & structure
3fo3-A-1004	`sad. +0.61 ruf. -0.48 dom. +0.06 bre. -0.10`	LYS	chainID: A, resSeq: 188, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 426.0 Å³ d(Fe-oop): 0.008 Å
3fo3-A-1004	`sad. +0.61 ruf. -0.48 dom. +0.06 bre. -0.10`	SO3	chainID: A, resSeq: 526, molecule: SULFITE ION
3fo3-A-1006	`sad. -0.23 ruf. -0.73 dom. +0.19 bre. -0.01`	HIS	chainID: A, resSeq: 119, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 410.0 Å³ d(Fe-oop): 0.018 Å
3fo3-A-1006	`sad. -0.23 ruf. -0.73 dom. +0.19 bre. -0.01`	HIS	chainID: A, resSeq: 300, molecule: Eight-heme nitrite reductase
3fo3-A-1007	`sad. +0.75 ruf. -0.66 dom. -0.08 bre. +0.04`	HIS	chainID: A, resSeq: 383, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 461.0 Å³ d(Fe-oop): 0.026 Å
3fo3-A-1007	`sad. +0.75 ruf. -0.66 dom. -0.08 bre. +0.04`	HIS	chainID: A, resSeq: 491, molecule: Eight-heme nitrite reductase
3fo3-A-1008	`sad. -0.41 ruf. -0.71 dom. +0.13 bre. -0.01`	HIS	chainID: A, resSeq: 372, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 573.0 Å³ d(Fe-oop): 0.008 Å
3fo3-A-1008	`sad. -0.41 ruf. -0.71 dom. +0.13 bre. -0.01`	HIS	chainID: A, resSeq: 415, molecule: Eight-heme nitrite reductase
3fo3-A-1002	`sad. -0.07 ruf. -0.43 dom. -0.03 bre. -0.09`	HIS	chainID: A, resSeq: 39, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 367.0 Å³ d(Fe-oop): 0.028 Å
3fo3-A-1002	`sad. -0.07 ruf. -0.43 dom. -0.03 bre. -0.09`	HIS	chainID: A, resSeq: 234, molecule: Eight-heme nitrite reductase
3fo3-A-1003	`sad. +0.39 ruf. -0.56 dom. +0.01 bre. -0.00`	HIS	chainID: A, resSeq: 30, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 559.0 Å³ d(Fe-oop): 0.018 Å
3fo3-A-1003	`sad. +0.39 ruf. -0.56 dom. +0.01 bre. -0.00`	HIS	chainID: A, resSeq: 70, molecule: Eight-heme nitrite reductase
3fo3-A-1001	`sad. +0.00 ruf. -0.42 dom. -0.07 bre. -0.08`	HIS	chainID: A, resSeq: 18, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 429.0 Å³ d(Fe-oop): 0.027 Å
3fo3-A-1001	`sad. +0.00 ruf. -0.42 dom. -0.07 bre. -0.08`	HIS	chainID: A, resSeq: 44, molecule: Eight-heme nitrite reductase
3fo3-B-1004	`sad. +0.60 ruf. -0.47 dom. +0.07 bre. -0.07`	LYS	chainID: B, resSeq: 188, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 424.0 Å³ d(Fe-oop): 0.026 Å
3fo3-B-1004	`sad. +0.60 ruf. -0.47 dom. +0.07 bre. -0.07`	SO3	chainID: B, resSeq: 526, molecule: SULFITE ION
3fo3-B-1005	`sad. +1.20 ruf. -0.35 dom. -0.03 bre. +0.04`	HIS	chainID: B, resSeq: 231, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 497.0 Å³ d(Fe-oop): 0.019 Å
3fo3-B-1005	`sad. +1.20 ruf. -0.35 dom. -0.03 bre. +0.04`	HIS	chainID: B, resSeq: 398, molecule: Eight-heme nitrite reductase
3fo3-B-1006	`sad. -0.23 ruf. -0.70 dom. +0.21 bre. -0.00`	HIS	chainID: B, resSeq: 119, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 422.0 Å³ d(Fe-oop): 0.003 Å
3fo3-B-1006	`sad. -0.23 ruf. -0.70 dom. +0.21 bre. -0.00`	HIS	chainID: B, resSeq: 300, molecule: Eight-heme nitrite reductase
3fo3-B-1007	`sad. +0.78 ruf. -0.68 dom. -0.08 bre. +0.04`	HIS	chainID: B, resSeq: 383, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 447.0 Å³ d(Fe-oop): 0.030 Å
3fo3-B-1007	`sad. +0.78 ruf. -0.68 dom. -0.08 bre. +0.04`	HIS	chainID: B, resSeq: 491, molecule: Eight-heme nitrite reductase
3fo3-B-1008	`sad. -0.42 ruf. -0.67 dom. +0.14 bre. -0.00`	HIS	chainID: B, resSeq: 372, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 548.0 Å³ d(Fe-oop): 0.006 Å
3fo3-B-1008	`sad. -0.42 ruf. -0.67 dom. +0.14 bre. -0.00`	HIS	chainID: B, resSeq: 415, molecule: Eight-heme nitrite reductase
3fo3-B-1002	`sad. -0.07 ruf. -0.38 dom. -0.01 bre. -0.09`	HIS	chainID: B, resSeq: 39, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 357.0 Å³ d(Fe-oop): 0.034 Å
3fo3-B-1002	`sad. -0.07 ruf. -0.38 dom. -0.01 bre. -0.09`	HIS	chainID: B, resSeq: 234, molecule: Eight-heme nitrite reductase
3fo3-B-1003	`sad. +0.39 ruf. -0.54 dom. +0.01 bre. -0.02`	HIS	chainID: B, resSeq: 30, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 546.0 Å³ d(Fe-oop): 0.021 Å
3fo3-B-1003	`sad. +0.39 ruf. -0.54 dom. +0.01 bre. -0.02`	HIS	chainID: B, resSeq: 70, molecule: Eight-heme nitrite reductase
3fo3-B-1001	`sad. -0.08 ruf. -0.34 dom. -0.07 bre. -0.10`	HIS	chainID: B, resSeq: 18, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 425.0 Å³ d(Fe-oop): 0.034 Å
3fo3-B-1001	`sad. -0.08 ruf. -0.34 dom. -0.07 bre. -0.10`	HIS	chainID: B, resSeq: 44, molecule: Eight-heme nitrite reductase