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PyDISH No: 05402

PDB: 3dtu,
chainID: C, resSeq: 575
heme type: A

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.15 Å

axial ligand #1: HIS

chainID: C,
resSeq: 419,
Coordination distance[Å]: 2.125
molecule: Cytochrome c oxidase subunit 1
EC number: 1.9.3.1
Organism: Rhodobacter sphaeroides

axial ligand #2: HOH

chainID: C,
resSeq: 589,
Coordination distance[Å]: 1.955
molecule: water

List of other hemes in pdb:3dtu

ID of heme Distortion Axial ligands on heme Function & structure
3dtu-A-1502
sad. -0.71
ruf. +0.24
dom. +0.21
bre. +0.08
HIS chainID: A,
resSeq: 102,
molecule: Cytochrome c oxidase subunit 1
oxidoreductase
oligomeric count: 2
pocket vol.: 576.0 Å3
d(Fe-oop): 0.029 Å
HIS chainID: A, resSeq: 421,
molecule: Cytochrome c oxidase subunit 1
3dtu-A-1503
sad. -0.38
ruf. +0.05
dom. +0.48
bre. -0.33
HIS chainID: A,
resSeq: 419,
molecule: Cytochrome c oxidase subunit 1
oxidoreductase
oligomeric count: 2
pocket vol.: 713.0 Å3
d(Fe-oop): 0.171 Å
HOH chainID: A, resSeq: 1511,
molecule: water
3dtu-C-574
sad. -0.71
ruf. +0.28
dom. +0.17
bre. +0.05
HIS chainID: C,
resSeq: 102,
molecule: Cytochrome c oxidase subunit 1
oxidoreductase
oligomeric count: 2
pocket vol.: 578.0 Å3
d(Fe-oop): 0.026 Å
HIS chainID: C, resSeq: 421,
molecule: Cytochrome c oxidase subunit 1