Browser

PyDISH No: 05368

PDB: 3dhr,
chainID: A, resSeq: 142
heme type: B

distortion

Protein data

function: oxygen carrier
experiment: X-RAY DIFFRACTION
resolution: 2.0 Å

axial ligand #1: HIS

chainID: A,
resSeq: 87,
Coordination distance[Å]: 2.211
molecule: Hemoglobin subunit alpha-A
Organism: Columba livia

axial ligand #2: HOH

chainID: A,
resSeq: 144,
Coordination distance[Å]: 2.057
molecule: water

List of other hemes in pdb:3dhr

ID of heme Distortion Axial ligands on heme Function & structure
3dhr-B-147
sad. +0.37
ruf. -0.25
dom. -0.37
bre. -0.29
HIS chainID: B,
resSeq: 92,
molecule: Hemoglobin subunit beta
oxygen carrier
oligomeric count: 4
pocket vol.: 558.0 Å3
d(Fe-oop): 0.074 Å
HOH chainID: B, resSeq: 148,
molecule: water
3dhr-C-142
sad. +0.24
ruf. -0.24
dom. -0.36
bre. -0.30
HIS chainID: C,
resSeq: 87,
molecule: Hemoglobin subunit alpha-A
oxygen carrier
oligomeric count: 4
pocket vol.: 570.0 Å3
d(Fe-oop): 0.046 Å
HOH chainID: C, resSeq: 144,
molecule: water
3dhr-D-147
sad. +0.35
ruf. -0.14
dom. -0.33
bre. -0.28
HIS chainID: D,
resSeq: 92,
molecule: Hemoglobin subunit beta
oxygen carrier
oligomeric count: 4
pocket vol.: 579.0 Å3
d(Fe-oop): 0.067 Å
HOH chainID: D, resSeq: 148,
molecule: water
3dhr-E-142
sad. +0.12
ruf. -0.33
dom. -0.27
bre. -0.32
HIS chainID: E,
resSeq: 87,
molecule: Hemoglobin subunit alpha-A
oxygen carrier
oligomeric count: 4
pocket vol.: 585.0 Å3
d(Fe-oop): 0.028 Å
HOH chainID: E, resSeq: 143,
molecule: water
3dhr-F-147
sad. +0.07
ruf. -0.39
dom. -0.14
bre. -0.29
HIS chainID: F,
resSeq: 92,
molecule: Hemoglobin subunit beta
oxygen carrier
oligomeric count: 4
pocket vol.: 553.0 Å3
d(Fe-oop): 0.038 Å
HOH chainID: F, resSeq: 148,
molecule: water
3dhr-G-142
sad. +0.21
ruf. -0.43
dom. -0.11
bre. -0.30
HIS chainID: G,
resSeq: 87,
molecule: Hemoglobin subunit alpha-A
oxygen carrier
oligomeric count: 4
pocket vol.: 583.0 Å3
d(Fe-oop): 0.024 Å
HOH chainID: G, resSeq: 144,
molecule: water
3dhr-H-147
sad. +0.28
ruf. -0.25
dom. -0.27
bre. -0.32
HIS chainID: H,
resSeq: 92,
molecule: Hemoglobin subunit beta
oxygen carrier
oligomeric count: 4
pocket vol.: 603.0 Å3
d(Fe-oop): 0.006 Å
HOH chainID: H, resSeq: 149,
molecule: water