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PyDISH No: 05343

PDB: 3d38,
chainID: C, resSeq: 402
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 3.21 Å

axial ligand #1: MET

chainID: C,
resSeq: 110,
Coordination distance[Å]: 2.308
molecule: Photosynthetic reaction center cytochrome c subunit
Organism: Blastochloris viridis

axial ligand #2: HIS

chainID: C,
resSeq: 136,
Coordination distance[Å]: 1.946
molecule: same as ligand #1

List of other hemes in pdb:3d38

ID of heme	Distortion	Axial ligands on heme		Function & structure
3d38-C-401	`sad. +0.74 ruf. -0.53 dom. +0.17 bre. -0.17`	MET	chainID: C, resSeq: 74, molecule: Photosynthetic reaction center cytochrome c subunit	electron transporter oligomeric count: 4 pocket vol.: 365.0 Å³ d(Fe-oop): 0.065 Å
3d38-C-401	`sad. +0.74 ruf. -0.53 dom. +0.17 bre. -0.17`	HIS	chainID: C, resSeq: 91, molecule: Photosynthetic reaction center cytochrome c subunit
3d38-C-403	`sad. +0.43 ruf. -0.68 dom. +0.18 bre. -0.17`	MET	chainID: C, resSeq: 233, molecule: Photosynthetic reaction center cytochrome c subunit	electron transporter oligomeric count: 4 pocket vol.: 333.0 Å³ d(Fe-oop): 0.019 Å
3d38-C-403	`sad. +0.43 ruf. -0.68 dom. +0.18 bre. -0.17`	HIS	chainID: C, resSeq: 248, molecule: Photosynthetic reaction center cytochrome c subunit
3d38-C-404	`sad. +0.15 ruf. -0.38 dom. +0.25 bre. -0.16`	HIS	chainID: C, resSeq: 124, molecule: Photosynthetic reaction center cytochrome c subunit	electron transporter oligomeric count: 4 pocket vol.: 346.0 Å³ d(Fe-oop): 0.122 Å
3d38-C-404	`sad. +0.15 ruf. -0.38 dom. +0.25 bre. -0.16`	HIS	chainID: C, resSeq: 309, molecule: Photosynthetic reaction center cytochrome c subunit