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PyDISH No: 05291

PDB: 3cxh,
chainID: D, resSeq: 4003
heme type: C

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.5 Å

axial ligand #1: HIS

chainID: D,
resSeq: 105,
Coordination distance[Å]: 1.974
molecule: Cytochrome c1, heme protein, mitochondrial
EC number: 1.10.2.2
Organism: Saccharomyces cerevisiae

axial ligand #2: MET

chainID: D,
resSeq: 225,
Coordination distance[Å]: 2.133
molecule: same as ligand #1

List of other hemes in pdb:3cxh

ID of heme	Distortion	Axial ligands on heme		Function & structure
3cxh-C-4001	`sad. +0.32 ruf. -0.08 dom. -0.05 bre. -0.10`	HIS	chainID: C, resSeq: 82, molecule: Cytochrome b	oxidoreductase oligomeric count: 23 pocket vol.: 414.0 Å³ d(Fe-oop): 0.019 Å
3cxh-C-4001	`sad. +0.32 ruf. -0.08 dom. -0.05 bre. -0.10`	HIS	chainID: C, resSeq: 183, molecule: Cytochrome b
3cxh-C-4002	`sad. -0.59 ruf. -0.19 dom. +0.18 bre. -0.08`	HIS	chainID: C, resSeq: 96, molecule: Cytochrome b	oxidoreductase oligomeric count: 23 pocket vol.: 408.0 Å³ d(Fe-oop): 0.020 Å
3cxh-C-4002	`sad. -0.59 ruf. -0.19 dom. +0.18 bre. -0.08`	HIS	chainID: C, resSeq: 197, molecule: Cytochrome b
3cxh-N-4021	`sad. +0.36 ruf. -0.33 dom. -0.02 bre. -0.02`	HIS	chainID: N, resSeq: 82, molecule: Cytochrome b	oxidoreductase oligomeric count: 23 pocket vol.: 417.0 Å³ d(Fe-oop): 0.013 Å
3cxh-N-4021	`sad. +0.36 ruf. -0.33 dom. -0.02 bre. -0.02`	HIS	chainID: N, resSeq: 183, molecule: Cytochrome b
3cxh-N-4022	`sad. -0.52 ruf. -0.27 dom. +0.16 bre. -0.06`	HIS	chainID: N, resSeq: 96, molecule: Cytochrome b	oxidoreductase oligomeric count: 23 pocket vol.: 396.0 Å³ d(Fe-oop): 0.037 Å
3cxh-N-4022	`sad. -0.52 ruf. -0.27 dom. +0.16 bre. -0.06`	HIS	chainID: N, resSeq: 197, molecule: Cytochrome b
3cxh-O-4023	`sad. -0.03 ruf. -0.30 dom. -0.17 bre. -0.14`	HIS	chainID: O, resSeq: 105, molecule: Cytochrome c1, heme protein, mitochondrial	oxidoreductase oligomeric count: 23 pocket vol.: 415.0 Å³ d(Fe-oop): 0.003 Å
3cxh-O-4023	`sad. -0.03 ruf. -0.30 dom. -0.17 bre. -0.14`	MET	chainID: O, resSeq: 225, molecule: Cytochrome c1, heme protein, mitochondrial
3cxh-W-4026	`sad. -0.27 ruf. -0.62 dom. -0.01 bre. -0.15`	HIS	chainID: W, resSeq: 27, molecule: Cytochrome c iso-2	electron transporter oligomeric count: 23 pocket vol.: 336.0 Å³ d(Fe-oop): 0.003 Å
3cxh-W-4026	`sad. -0.27 ruf. -0.62 dom. -0.01 bre. -0.15`	MET	chainID: W, resSeq: 89, molecule: Cytochrome c iso-2