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PyDISH No: 05278

PDB: 3cwb,
chainID: D, resSeq: 501
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 3.51 Å

axial ligand #1: HIS

chainID: D,
resSeq: 41,
Coordination distance[Å]: 2.008
molecule: MITOCHONDRIAL CYTOCHROME C1, HEME PROTEIN
Organism: Gallus gallus

axial ligand #2: MET

chainID: D,
resSeq: 160,
Coordination distance[Å]: 2.118
molecule: same as ligand #1

List of other hemes in pdb:3cwb

ID of heme Distortion Axial ligands on heme Function & structure
3cwb-C-501
sad. +0.33
ruf. -0.03
dom. -0.18
bre. +0.22
HIS chainID: C,
resSeq: 84,
molecule: Cytochrome b
oxidoreductase
oligomeric count: 20
pocket vol.: 386.0 Å3
d(Fe-oop): 0.043 Å
HIS chainID: C, resSeq: 183,
molecule: Cytochrome b
3cwb-C-502
sad. -0.59
ruf. -0.01
dom. +0.35
bre. +0.20
HIS chainID: C,
resSeq: 98,
molecule: Cytochrome b
oxidoreductase
oligomeric count: 20
pocket vol.: 381.0 Å3
d(Fe-oop): 0.015 Å
HIS chainID: C, resSeq: 197,
molecule: Cytochrome b
3cwb-P-501
sad. +0.41
ruf. +0.13
dom. -0.18
bre. +0.10
HIS chainID: P,
resSeq: 84,
molecule: Cytochrome b
oxidoreductase
oligomeric count: 20
pocket vol.: 405.0 Å3
d(Fe-oop): 0.037 Å
HIS chainID: P, resSeq: 183,
molecule: Cytochrome b
3cwb-P-502
sad. -0.74
ruf. -0.01
dom. +0.27
bre. +0.26
HIS chainID: P,
resSeq: 98,
molecule: Cytochrome b
oxidoreductase
oligomeric count: 20
pocket vol.: 395.0 Å3
d(Fe-oop): 0.011 Å
HIS chainID: P, resSeq: 197,
molecule: Cytochrome b
3cwb-Q-501
sad. +0.14
ruf. +0.08
dom. +0.01
bre. +0.08
HIS chainID: Q,
resSeq: 41,
molecule: MITOCHONDRIAL CYTOCHROME C1, HEME PROTEIN
electron transporter
oligomeric count: 20
pocket vol.: 472.0 Å3
d(Fe-oop): 0.011 Å
MET chainID: Q, resSeq: 160,
molecule: MITOCHONDRIAL CYTOCHROME C1, HEME PROTEIN