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PyDISH No: 05087

PDB: 3ag1,
chainID: A, resSeq: 516
heme type: A

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.2 Å

axial ligand #1: HIS

chainID: A,
resSeq: 376,
Coordination distance[Å]: 2.083
molecule: Cytochrome c oxidase subunit 1
EC number: 1.9.3.1
Organism: Bos taurus

axial ligand #2: CMO

chainID: A,
resSeq: 520,
Coordination distance[Å]: 1.849
molecule: CARBON MONOXIDE

List of other hemes in pdb:3ag1

ID of heme Distortion Axial ligands on heme Function & structure
3ag1-A-515
sad. -0.66
ruf. +0.41
dom. +0.20
bre. -0.25
HIS chainID: A,
resSeq: 61,
molecule: Cytochrome c oxidase subunit 1
oxidoreductase
oligomeric count: 13
pocket vol.: 635.0 Å3
d(Fe-oop): 0.037 Å
HIS chainID: A, resSeq: 378,
molecule: Cytochrome c oxidase subunit 1
3ag1-N-515
sad. -0.55
ruf. +0.41
dom. +0.18
bre. -0.19
HIS chainID: N,
resSeq: 61,
molecule: Cytochrome c oxidase subunit 1
oxidoreductase
oligomeric count: 13
pocket vol.: 636.0 Å3
d(Fe-oop): 0.011 Å
HIS chainID: N, resSeq: 378,
molecule: Cytochrome c oxidase subunit 1
3ag1-N-516
sad. -0.27
ruf. -0.02
dom. +0.43
bre. -0.06
HIS chainID: N,
resSeq: 376,
molecule: Cytochrome c oxidase subunit 1
oxidoreductase
oligomeric count: 13
pocket vol.: 736.0 Å3
d(Fe-oop): 0.163 Å
CMO chainID: N, resSeq: 520,
molecule: CARBON MONOXIDE