Browser

select function

select ligand

clear

→ advanced search

PyDISH No: 05064

PDB: 3abm,
chainID: A, resSeq: 516
heme type: A

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 1.95 Å
origomeric count: 13

axial ligand #1: HIS

chainID: A,
resSeq: 376,
Coordination distance[Å]: 2.009
molecule: Cytochrome c oxidase subunit 1
EC number: 1.9.3.1
Organism: Bos taurus

axial ligand #2: PER

chainID: A,
resSeq: 520,
Coordination distance[Å]: 2.187
molecule: PEROXIDE ION

List of other hemes in pdb:3abm

ID of heme	Distortion	Axial ligands on heme		Function & structure
3abm-A-515	`sad. -0.46 ruf. -0.06 dom. +0.23 bre. -0.21`	HIS	chainID: A, resSeq: 61, molecule: Cytochrome c oxidase subunit 1	oxidoreductase oligomeric count: 13 pocket vol.: 553.0 Å³ d(Fe-oop): 0.035 Å
3abm-A-515	`sad. -0.46 ruf. -0.06 dom. +0.23 bre. -0.21`	HIS	chainID: A, resSeq: 378, molecule: Cytochrome c oxidase subunit 1
3abm-N-515	`sad. -0.60 ruf. -0.06 dom. +0.26 bre. -0.26`	HIS	chainID: N, resSeq: 61, molecule: Cytochrome c oxidase subunit 1	oxidoreductase oligomeric count: 13 pocket vol.: 594.0 Å³ d(Fe-oop): 0.068 Å
3abm-N-515	`sad. -0.60 ruf. -0.06 dom. +0.26 bre. -0.26`	HIS	chainID: N, resSeq: 378, molecule: Cytochrome c oxidase subunit 1
3abm-N-516	`sad. -0.33 ruf. -0.16 dom. +0.32 bre. -0.25`	HIS	chainID: N, resSeq: 376, molecule: Cytochrome c oxidase subunit 1	oxidoreductase oligomeric count: 13 pocket vol.: 680.0 Å³ d(Fe-oop): 0.155 Å
3abm-N-516	`sad. -0.33 ruf. -0.16 dom. +0.32 bre. -0.25`	PER	chainID: N, resSeq: 520, molecule: PEROXIDE ION