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PyDISH No: 05058

PDB: 3abk,
chainID: N, resSeq: 516
heme type: A

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.0 Å

axial ligand #1: HIS

chainID: N,
resSeq: 376,
Coordination distance[Å]: 2.286
molecule: Cytochrome c oxidase subunit 1
EC number: 1.9.3.1
Organism: Bos taurus

axial ligand #2: NO

chainID: N,
resSeq: 520,
Coordination distance[Å]: 2.727
molecule: NITRIC OXIDE

List of other hemes in pdb:3abk

ID of heme Distortion Axial ligands on heme Function & structure
3abk-A-515
sad. -0.74
ruf. +0.20
dom. +0.16
bre. -0.30
HIS chainID: A,
resSeq: 61,
molecule: Cytochrome c oxidase subunit 1
oxidoreductase
oligomeric count: 13
pocket vol.: 539.0 Å3
d(Fe-oop): 0.023 Å
HIS chainID: A, resSeq: 378,
molecule: Cytochrome c oxidase subunit 1
3abk-A-516
sad. -0.42
ruf. -0.05
dom. +0.48
bre. -0.03
HIS chainID: A,
resSeq: 376,
molecule: Cytochrome c oxidase subunit 1
oxidoreductase
oligomeric count: 13
pocket vol.: 673.0 Å3
d(Fe-oop): 0.194 Å
NO chainID: A, resSeq: 520,
molecule: NITRIC OXIDE
3abk-N-515
sad. -0.53
ruf. +0.22
dom. +0.18
bre. -0.43
HIS chainID: N,
resSeq: 61,
molecule: Cytochrome c oxidase subunit 1
oxidoreductase
oligomeric count: 13
pocket vol.: 585.0 Å3
d(Fe-oop): 0.032 Å
HIS chainID: N, resSeq: 378,
molecule: Cytochrome c oxidase subunit 1