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PyDISH No: 05004

PDB: 3a16,
chainID: A, resSeq: 354
heme type: B

distortion

Protein data

function: lyase
experiment: X-RAY DIFFRACTION
resolution: 1.6 Å

axial ligand #1: HIS

chainID: A,
resSeq: 299,
Coordination distance[Å]: 2.195
molecule: Aldoxime dehydratase
EC number: 4.99.1.5
Organism: Rhodococcus erythropolis

axial ligand #2: PXO

chainID: A,
resSeq: 355,
Coordination distance[Å]: 2.525
molecule: (1Z)-propanal oxime

List of other hemes in pdb:3a16

ID of heme Distortion Axial ligands on heme Function & structure
3a16-B-354
sad. -0.06
ruf. +0.85
dom. -0.39
bre. -0.14
HIS chainID: B,
resSeq: 299,
molecule: Aldoxime dehydratase
lyase
oligomeric count: 2
pocket vol.: 450.0 Å3
d(Fe-oop): 0.145 Å
PXO chainID: B, resSeq: 355,
molecule: (1Z)-propanal oxime
3a16-C-354
sad. -0.06
ruf. +0.81
dom. -0.47
bre. -0.12
HIS chainID: C,
resSeq: 299,
molecule: Aldoxime dehydratase
lyase
oligomeric count: 2
pocket vol.: 489.0 Å3
d(Fe-oop): 0.146 Å
PXO chainID: C, resSeq: 355,
molecule: (1Z)-propanal oxime
3a16-D-354
sad. -0.06
ruf. +0.84
dom. -0.40
bre. -0.16
HIS chainID: D,
resSeq: 299,
molecule: Aldoxime dehydratase
lyase
oligomeric count: 2
pocket vol.: 436.0 Å3
d(Fe-oop): 0.160 Å
PXO chainID: D, resSeq: 355,
molecule: (1Z)-propanal oxime