Browser
Protein data
function: oxidoreductaseexperiment: X-RAY DIFFRACTION
resolution: 1.7 Å
axial ligand #1: HIS
chainID: B,resSeq: 30,
Coordination distance[Å]: 1.961
molecule: Eight-heme nitrite reductase
Organism: Thioalkalivibrio nitratireducens
axial ligand #2: HIS
chainID: B,resSeq: 70,
Coordination distance[Å]: 1.959
molecule: same as ligand #1
List of other hemes in pdb:2zo5
ID of heme | Distortion | Axial ligands on heme | Function & structure | |
---|---|---|---|---|
2zo5-A-1004 |
sad. +0.59 ruf. -0.42 dom. +0.16 bre. +0.02 |
AZI | chainID: A, resSeq: 526, molecule: AZIDE ION |
oxidoreductase oligomeric count: 6 pocket vol.: 394.0 Å3 d(Fe-oop): 0.004 Å |
HOH | chainID: A, resSeq: 1014, molecule: water |
|||
2zo5-A-1005 |
sad. +1.10 ruf. -0.29 dom. -0.04 bre. +0.09 |
HIS | chainID: A, resSeq: 231, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 468.0 Å3 d(Fe-oop): 0.024 Å |
HIS | chainID: A, resSeq: 398, molecule: Eight-heme nitrite reductase |
|||
2zo5-A-1006 |
sad. -0.20 ruf. -0.75 dom. +0.21 bre. +0.01 |
HIS | chainID: A, resSeq: 119, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 411.0 Å3 d(Fe-oop): 0.002 Å |
HIS | chainID: A, resSeq: 300, molecule: Eight-heme nitrite reductase |
|||
2zo5-A-1007 |
sad. +0.77 ruf. -0.68 dom. -0.12 bre. +0.10 |
HIS | chainID: A, resSeq: 383, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 440.0 Å3 d(Fe-oop): 0.035 Å |
HIS | chainID: A, resSeq: 491, molecule: Eight-heme nitrite reductase |
|||
2zo5-A-1008 |
sad. -0.35 ruf. -0.83 dom. +0.16 bre. +0.03 |
HIS | chainID: A, resSeq: 372, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 565.0 Å3 d(Fe-oop): 0.044 Å |
HIS | chainID: A, resSeq: 415, molecule: Eight-heme nitrite reductase |
|||
2zo5-A-1002 |
sad. -0.12 ruf. -0.41 dom. +0.03 bre. -0.09 |
HIS | chainID: A, resSeq: 39, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 369.0 Å3 d(Fe-oop): 0.047 Å |
HIS | chainID: A, resSeq: 234, molecule: Eight-heme nitrite reductase |
|||
2zo5-A-1003 |
sad. +0.38 ruf. -0.56 dom. +0.02 bre. -0.01 |
HIS | chainID: A, resSeq: 30, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 510.0 Å3 d(Fe-oop): 0.035 Å |
HIS | chainID: A, resSeq: 70, molecule: Eight-heme nitrite reductase |
|||
2zo5-A-1001 |
sad. +0.07 ruf. -0.34 dom. -0.03 bre. -0.08 |
HIS | chainID: A, resSeq: 18, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 410.0 Å3 d(Fe-oop): 0.060 Å |
HIS | chainID: A, resSeq: 44, molecule: Eight-heme nitrite reductase |
|||
2zo5-B-1004 |
sad. +0.62 ruf. -0.45 dom. +0.17 bre. +0.03 |
LYS | chainID: B, resSeq: 188, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 391.0 Å3 d(Fe-oop): 0.018 Å |
AZI | chainID: B, resSeq: 526, molecule: AZIDE ION |
|||
2zo5-B-1005 |
sad. +1.13 ruf. -0.27 dom. -0.00 bre. +0.05 |
HIS | chainID: B, resSeq: 231, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 476.0 Å3 d(Fe-oop): 0.028 Å |
HIS | chainID: B, resSeq: 398, molecule: Eight-heme nitrite reductase |
|||
2zo5-B-1006 |
sad. -0.19 ruf. -0.75 dom. +0.20 bre. -0.04 |
HIS | chainID: B, resSeq: 119, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 407.0 Å3 d(Fe-oop): 0.006 Å |
HIS | chainID: B, resSeq: 300, molecule: Eight-heme nitrite reductase |
|||
2zo5-B-1007 |
sad. +0.76 ruf. -0.61 dom. -0.11 bre. +0.08 |
HIS | chainID: B, resSeq: 383, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 467.0 Å3 d(Fe-oop): 0.040 Å |
HIS | chainID: B, resSeq: 491, molecule: Eight-heme nitrite reductase |
|||
2zo5-B-1008 |
sad. -0.29 ruf. -0.85 dom. +0.13 bre. +0.03 |
HIS | chainID: B, resSeq: 372, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 523.0 Å3 d(Fe-oop): 0.058 Å |
HIS | chainID: B, resSeq: 415, molecule: Eight-heme nitrite reductase |
|||
2zo5-B-1002 |
sad. -0.09 ruf. -0.37 dom. +0.02 bre. -0.05 |
HIS | chainID: B, resSeq: 39, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 357.0 Å3 d(Fe-oop): 0.039 Å |
HIS | chainID: B, resSeq: 234, molecule: Eight-heme nitrite reductase |
|||
2zo5-B-1001 |
sad. -0.18 ruf. -0.36 dom. -0.05 bre. -0.12 |
HIS | chainID: B, resSeq: 18, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 419.0 Å3 d(Fe-oop): 0.065 Å |
HIS | chainID: B, resSeq: 44, molecule: Eight-heme nitrite reductase |