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PyDISH No: 04846

PDB: 2z47,
chainID: A, resSeq: 1003
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 1.6 Å

axial ligand #1: HIS

chainID: A,
resSeq: 25,
Coordination distance[Å]: 1.985
molecule: Cytochrome c3
Organism: Desulfovibrio vulgaris str. 'Miyazaki F'

axial ligand #2: HIS

chainID: A,
resSeq: 83,
Coordination distance[Å]: 2.015
molecule: same as ligand #1

List of other hemes in pdb:2z47

ID of heme	Distortion	Axial ligands on heme		Function & structure
2z47-A-1004	`sad. +0.99 ruf. +0.49 dom. +0.15 bre. -0.15`	HIS	chainID: A, resSeq: 70, molecule: Cytochrome c3	electron transporter oligomeric count: 1 pocket vol.: 377.0 Å³ d(Fe-oop): 0.044 Å
2z47-A-1004	`sad. +0.99 ruf. +0.49 dom. +0.15 bre. -0.15`	HIS	chainID: A, resSeq: 106, molecule: Cytochrome c3
2z47-A-1002	`sad. +0.15 ruf. -0.70 dom. -0.09 bre. -0.18`	HIS	chainID: A, resSeq: 35, molecule: Cytochrome c3	electron transporter oligomeric count: 1 pocket vol.: 494.0 Å³ d(Fe-oop): 0.004 Å
2z47-A-1002	`sad. +0.15 ruf. -0.70 dom. -0.09 bre. -0.18`	HIS	chainID: A, resSeq: 52, molecule: Cytochrome c3
2z47-A-1001	`sad. +0.26 ruf. -0.63 dom. -0.23 bre. -0.20`	HIS	chainID: A, resSeq: 22, molecule: Cytochrome c3	electron transporter oligomeric count: 1 pocket vol.: 454.0 Å³ d(Fe-oop): 0.016 Å
2z47-A-1001	`sad. +0.26 ruf. -0.63 dom. -0.23 bre. -0.20`	HIS	chainID: A, resSeq: 34, molecule: Cytochrome c3
2z47-B-3004	`sad. +0.95 ruf. +0.49 dom. +0.13 bre. -0.12`	HIS	chainID: B, resSeq: 2070, molecule: Cytochrome c3	electron transporter oligomeric count: 1 pocket vol.: 398.0 Å³ d(Fe-oop): 0.007 Å
2z47-B-3004	`sad. +0.95 ruf. +0.49 dom. +0.13 bre. -0.12`	HIS	chainID: B, resSeq: 2106, molecule: Cytochrome c3
2z47-B-3002	`sad. +0.04 ruf. -0.62 dom. -0.10 bre. -0.20`	HIS	chainID: B, resSeq: 2035, molecule: Cytochrome c3	electron transporter oligomeric count: 1 pocket vol.: 501.0 Å³ d(Fe-oop): 0.014 Å
2z47-B-3002	`sad. +0.04 ruf. -0.62 dom. -0.10 bre. -0.20`	HIS	chainID: B, resSeq: 2052, molecule: Cytochrome c3
2z47-B-3001	`sad. +0.25 ruf. -0.73 dom. -0.22 bre. -0.15`	HIS	chainID: B, resSeq: 2022, molecule: Cytochrome c3	electron transporter oligomeric count: 1 pocket vol.: 447.0 Å³ d(Fe-oop): 0.032 Å
2z47-B-3001	`sad. +0.25 ruf. -0.73 dom. -0.22 bre. -0.15`	HIS	chainID: B, resSeq: 2034, molecule: Cytochrome c3
2z47-B-3003	`sad. +0.17 ruf. -0.25 dom. -0.15 bre. -0.20`	HIS	chainID: B, resSeq: 2025, molecule: Cytochrome c3	electron transporter oligomeric count: 1 pocket vol.: 478.0 Å³ d(Fe-oop): 0.013 Å
2z47-B-3003	`sad. +0.17 ruf. -0.25 dom. -0.15 bre. -0.20`	HIS	chainID: B, resSeq: 2083, molecule: Cytochrome c3