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PyDISH No: 04835

PDB: 2yyx,
chainID: A, resSeq: 1003
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 1.0 Å

axial ligand #1: HIS

chainID: A,
resSeq: 25,
Coordination distance[Å]: 1.953
molecule: Cytochrome c3
Organism: Desulfovibrio vulgaris str. 'Miyazaki F'

axial ligand #2: HIS

chainID: A,
resSeq: 83,
Coordination distance[Å]: 1.99
molecule: same as ligand #1

List of other hemes in pdb:2yyx

ID of heme	Distortion	Axial ligands on heme		Function & structure
2yyx-A-1004	`sad. +0.97 ruf. +0.14 dom. +0.03 bre. -0.03`	HIS	chainID: A, resSeq: 70, molecule: Cytochrome c3	electron transporter oligomeric count: 1 pocket vol.: 414.0 Å³ d(Fe-oop): 0.002 Å
2yyx-A-1004	`sad. +0.97 ruf. +0.14 dom. +0.03 bre. -0.03`	HIS	chainID: A, resSeq: 106, molecule: Cytochrome c3
2yyx-A-1002	`sad. -0.02 ruf. -0.84 dom. -0.04 bre. +0.02`	HIS	chainID: A, resSeq: 35, molecule: Cytochrome c3	electron transporter oligomeric count: 1 pocket vol.: 487.0 Å³ d(Fe-oop): 0.012 Å
2yyx-A-1002	`sad. -0.02 ruf. -0.84 dom. -0.04 bre. +0.02`	HIS	chainID: A, resSeq: 52, molecule: Cytochrome c3
2yyx-A-1001	`sad. +0.10 ruf. -0.87 dom. -0.18 bre. -0.04`	HIS	chainID: A, resSeq: 22, molecule: Cytochrome c3	electron transporter oligomeric count: 1 pocket vol.: 464.0 Å³ d(Fe-oop): 0.017 Å
2yyx-A-1001	`sad. +0.10 ruf. -0.87 dom. -0.18 bre. -0.04`	HIS	chainID: A, resSeq: 34, molecule: Cytochrome c3