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PyDISH No: 04832

PDB: 2yyx,
chainID: A, resSeq: 1004
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 1.0 Å

axial ligand #1: HIS

chainID: A,
resSeq: 70,
Coordination distance[Å]: 1.993
molecule: Cytochrome c3
Organism: Desulfovibrio vulgaris str. 'Miyazaki F'

axial ligand #2: HIS

chainID: A,
resSeq: 106,
Coordination distance[Å]: 1.961
molecule: same as ligand #1

List of other hemes in pdb:2yyx

ID of heme	Distortion	Axial ligands on heme		Function & structure
2yyx-A-1002	`sad. -0.02 ruf. -0.84 dom. -0.04 bre. +0.02`	HIS	chainID: A, resSeq: 35, molecule: Cytochrome c3	electron transporter oligomeric count: 1 pocket vol.: 487.0 Å³ d(Fe-oop): 0.012 Å
2yyx-A-1002	`sad. -0.02 ruf. -0.84 dom. -0.04 bre. +0.02`	HIS	chainID: A, resSeq: 52, molecule: Cytochrome c3
2yyx-A-1001	`sad. +0.10 ruf. -0.87 dom. -0.18 bre. -0.04`	HIS	chainID: A, resSeq: 22, molecule: Cytochrome c3	electron transporter oligomeric count: 1 pocket vol.: 464.0 Å³ d(Fe-oop): 0.017 Å
2yyx-A-1001	`sad. +0.10 ruf. -0.87 dom. -0.18 bre. -0.04`	HIS	chainID: A, resSeq: 34, molecule: Cytochrome c3
2yyx-A-1003	`sad. +0.21 ruf. -0.25 dom. -0.09 bre. -0.08`	HIS	chainID: A, resSeq: 25, molecule: Cytochrome c3	electron transporter oligomeric count: 1 pocket vol.: 506.0 Å³ d(Fe-oop): 0.004 Å
2yyx-A-1003	`sad. +0.21 ruf. -0.25 dom. -0.09 bre. -0.08`	HIS	chainID: A, resSeq: 83, molecule: Cytochrome c3