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PyDISH No: 04759

PDB: 2y69,
chainID: A, resSeq: 516
heme type: A

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 1.95 Å
origomeric count: 13

axial ligand #1: HIS

chainID: A,
resSeq: 376,
Coordination distance[Å]: 1.999
molecule: CYTOCHROME C OXIDASE SUBUNIT 1
EC number: 1.9.3.1
Organism: BOS TAURUS

axial ligand #2: OXY

chainID: A,
resSeq: 1515,
Coordination distance[Å]: 2.239
molecule: OXYGEN MOLECULE

List of other hemes in pdb:2y69

ID of heme Distortion Axial ligands on heme Function & structure
2y69-A-515
 sad. -0.06
ruf. -0.01
dom. +0.07
bre. -0.16
 HIS chainID: A,
resSeq: 61,
molecule: CYTOCHROME C OXIDASE SUBUNIT 1		 oxidoreductase
oligomeric count: 13
pocket vol.: 546.0 Å3
d(Fe-oop): 0.054 Å
HIS chainID: A, resSeq: 378,
molecule: CYTOCHROME C OXIDASE SUBUNIT 1
2y69-N-515
 sad. -0.05
ruf. +0.01
dom. +0.03
bre. -0.15
 HIS chainID: N,
resSeq: 61,
molecule: CYTOCHROME C OXIDASE SUBUNIT 1		 oxidoreductase
oligomeric count: 13
pocket vol.: 602.0 Å3
d(Fe-oop): 0.030 Å
HIS chainID: N, resSeq: 378,
molecule: CYTOCHROME C OXIDASE SUBUNIT 1
2y69-N-516
 sad. -0.04
ruf. +0.00
dom. +0.08
bre. -0.06
 HIS chainID: N,
resSeq: 376,
molecule: CYTOCHROME C OXIDASE SUBUNIT 1		 oxidoreductase
oligomeric count: 13
pocket vol.: 670.0 Å3
d(Fe-oop): 0.122 Å
OXY chainID: N, resSeq: 1515,
molecule: OXYGEN MOLECULE