Browser

select function

select ligand

clear

→ advanced search

PyDISH No: 04758

PDB: 2y69,
chainID: A, resSeq: 515
heme type: A

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 1.95 Å
origomeric count: 13

axial ligand #1: HIS

chainID: A,
resSeq: 61,
Coordination distance[Å]: 1.946
molecule: CYTOCHROME C OXIDASE SUBUNIT 1
EC number: 1.9.3.1
Organism: BOS TAURUS

axial ligand #2: HIS

chainID: A,
resSeq: 378,
Coordination distance[Å]: 1.922
molecule: same as ligand #1

List of other hemes in pdb:2y69

ID of heme	Distortion	Axial ligands on heme		Function & structure
2y69-A-516	`sad. -0.07 ruf. -0.01 dom. +0.10 bre. -0.10`	HIS	chainID: A, resSeq: 376, molecule: CYTOCHROME C OXIDASE SUBUNIT 1	oxidoreductase oligomeric count: 13 pocket vol.: 672.0 Å³ d(Fe-oop): 0.141 Å
2y69-A-516	`sad. -0.07 ruf. -0.01 dom. +0.10 bre. -0.10`	OXY	chainID: A, resSeq: 1515, molecule: OXYGEN MOLECULE
2y69-N-515	`sad. -0.05 ruf. +0.01 dom. +0.03 bre. -0.15`	HIS	chainID: N, resSeq: 61, molecule: CYTOCHROME C OXIDASE SUBUNIT 1	oxidoreductase oligomeric count: 13 pocket vol.: 602.0 Å³ d(Fe-oop): 0.030 Å
2y69-N-515	`sad. -0.05 ruf. +0.01 dom. +0.03 bre. -0.15`	HIS	chainID: N, resSeq: 378, molecule: CYTOCHROME C OXIDASE SUBUNIT 1
2y69-N-516	`sad. -0.04 ruf. +0.00 dom. +0.08 bre. -0.06`	HIS	chainID: N, resSeq: 376, molecule: CYTOCHROME C OXIDASE SUBUNIT 1	oxidoreductase oligomeric count: 13 pocket vol.: 670.0 Å³ d(Fe-oop): 0.122 Å
2y69-N-516	`sad. -0.04 ruf. +0.00 dom. +0.08 bre. -0.06`	OXY	chainID: N, resSeq: 1515, molecule: OXYGEN MOLECULE