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PyDISH No: 04737

PDB: 2y3q,
chainID: C, resSeq: 200
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 1.55 Å

axial ligand #1: MET

chainID: C,
resSeq: 52,
Coordination distance[Å]: 2.313
molecule: BACTERIOFERRITIN
Organism: ESCHERICHIA COLI

axial ligand #2: MET

chainID: D,
resSeq: 52,
Coordination distance[Å]: 2.27
molecule: BACTERIOFERRITIN
Organism: ESCHERICHIA COLI

List of other hemes in pdb:2y3q

ID of heme Distortion Axial ligands on heme Function & structure
2y3q-A-200
sad. -0.29
ruf. -0.16
dom. -0.10
bre. -0.10
MET chainID: A,
resSeq: 52,
molecule: BACTERIOFERRITIN
oxidoreductase
oligomeric count: 24
pocket vol.: 510.0 Å3
d(Fe-oop): 0.013 Å
MET chainID: B, resSeq: 52,
molecule: BACTERIOFERRITIN
2y3q-B-200
sad. -0.33
ruf. -0.18
dom. -0.14
bre. -0.26
MET chainID: A,
resSeq: 52,
molecule: BACTERIOFERRITIN
oxidoreductase
oligomeric count: 24
pocket vol.: 501.0 Å3
d(Fe-oop): 0.044 Å
MET chainID: B, resSeq: 52,
molecule: BACTERIOFERRITIN
2y3q-D-200
sad. -0.25
ruf. +0.08
dom. +0.05
bre. -0.27
MET chainID: C,
resSeq: 52,
molecule: BACTERIOFERRITIN
oxidoreductase
oligomeric count: 24
pocket vol.: 533.0 Å3
d(Fe-oop): 0.009 Å
MET chainID: D, resSeq: 52,
molecule: BACTERIOFERRITIN
2y3q-E-200
sad. -0.21
ruf. -0.08
dom. -0.02
bre. -0.17
MET chainID: E,
resSeq: 52,
molecule: BACTERIOFERRITIN
oxidoreductase
oligomeric count: 24
pocket vol.: 525.0 Å3
d(Fe-oop): 0.017 Å
MET chainID: F, resSeq: 52,
molecule: BACTERIOFERRITIN
2y3q-F-200
sad. -0.27
ruf. -0.09
dom. -0.05
bre. -0.19
MET chainID: E,
resSeq: 52,
molecule: BACTERIOFERRITIN
oxidoreductase
oligomeric count: 24
pocket vol.: 512.0 Å3
d(Fe-oop): 0.009 Å
MET chainID: F, resSeq: 52,
molecule: BACTERIOFERRITIN
2y3q-G-200
sad. -0.12
ruf. +0.02
dom. -0.17
bre. -0.24
MET chainID: G,
resSeq: 52,
molecule: BACTERIOFERRITIN
oxidoreductase
oligomeric count: 24
pocket vol.: 526.0 Å3
d(Fe-oop): 0.054 Å
MET chainID: H, resSeq: 52,
molecule: BACTERIOFERRITIN
2y3q-H-200
sad. -0.38
ruf. +0.04
dom. -0.09
bre. -0.13
MET chainID: G,
resSeq: 52,
molecule: BACTERIOFERRITIN
oxidoreductase
oligomeric count: 24
pocket vol.: 525.0 Å3
d(Fe-oop): 0.016 Å
MET chainID: H, resSeq: 52,
molecule: BACTERIOFERRITIN
2y3q-I-200
sad. -0.34
ruf. -0.14
dom. -0.14
bre. -0.17
MET chainID: I,
resSeq: 52,
molecule: BACTERIOFERRITIN
oxidoreductase
oligomeric count: 24
pocket vol.: 503.0 Å3
d(Fe-oop): 0.127 Å
MET chainID: J, resSeq: 52,
molecule: BACTERIOFERRITIN
2y3q-J-200
sad. -0.32
ruf. -0.10
dom. -0.10
bre. -0.08
MET chainID: I,
resSeq: 52,
molecule: BACTERIOFERRITIN
oxidoreductase
oligomeric count: 24
pocket vol.: 510.0 Å3
d(Fe-oop): 0.042 Å
MET chainID: J, resSeq: 52,
molecule: BACTERIOFERRITIN
2y3q-K-200
sad. -0.26
ruf. +0.01
dom. -0.15
bre. -0.19
MET chainID: K,
resSeq: 52,
molecule: BACTERIOFERRITIN
oxidoreductase
oligomeric count: 24
pocket vol.: 542.0 Å3
d(Fe-oop): 0.008 Å
MET chainID: L, resSeq: 52,
molecule: BACTERIOFERRITIN
2y3q-L-200
sad. -0.42
ruf. -0.00
dom. -0.10
bre. -0.15
MET chainID: K,
resSeq: 52,
molecule: BACTERIOFERRITIN
oxidoreductase
oligomeric count: 24
pocket vol.: 527.0 Å3
d(Fe-oop): 0.065 Å
MET chainID: L, resSeq: 52,
molecule: BACTERIOFERRITIN