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PyDISH No: 04645

PDB: 2ws3,
chainID: K, resSeq: 1130
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 3.2 Å

axial ligand #1: HIS

chainID: K,
resSeq: 84,
Coordination distance[Å]: 1.977
molecule: SUCCINATE DEHYDROGENASE CYTOCHROME B-556 SUBUNIT
EC number: 1.3.5.1
Organism: ESCHERICHIA COLI

axial ligand #2: HIS

chainID: L,
resSeq: 71,
Coordination distance[Å]: 1.948
molecule: SUCCINATE DEHYDROGENASE HYDROPHOBIC MEMBRANE ANCHOR SUBUNIT
EC number: 1.3.5.1
Organism: ESCHERICHIA COLI

List of other hemes in pdb:2ws3

ID of heme Distortion Axial ligands on heme Function & structure
2ws3-C-1130
sad. -0.79
ruf. +0.39
dom. -0.06
bre. -0.14
HIS chainID: C,
resSeq: 84,
molecule: SUCCINATE DEHYDROGENASE CYTOCHROME B-556 SUBUNIT
oxidoreductase
oligomeric count: 4
pocket vol.: 452.0 Å3
d(Fe-oop): 0.002 Å
HIS chainID: D, resSeq: 71,
molecule: SUCCINATE DEHYDROGENASE HYDROPHOBIC MEMBRANE ANCHOR SUBUNIT
2ws3-G-1130
sad. -0.44
ruf. +0.52
dom. -0.16
bre. -0.16
HIS chainID: G,
resSeq: 84,
molecule: SUCCINATE DEHYDROGENASE CYTOCHROME B-556 SUBUNIT
oxidoreductase
oligomeric count: 4
pocket vol.: 466.0 Å3
d(Fe-oop): 0.096 Å
HIS chainID: H, resSeq: 71,
molecule: SUCCINATE DEHYDROGENASE HYDROPHOBIC MEMBRANE ANCHOR SUBUNIT