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PyDISH No: 04640

PDB: 2wp9,
chainID: K, resSeq: 1129
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.7 Å

axial ligand #1: HIS

chainID: K,
resSeq: 84,
Coordination distance[Å]: 1.982
molecule: SUCCINATE DEHYDROGENASE CYTOCHROME B556 SUBUNIT
EC number: 1.3.5.1
Organism: ESCHERICHIA COLI

axial ligand #2: HIS

chainID: L,
resSeq: 71,
Coordination distance[Å]: 1.988
molecule: SUCCINATE DEHYDROGENASE HYDROPHOBIC MEMBRANE ANCHOR SUBUNIT
EC number: 1.3.5.1
Organism: ESCHERICHIA COLI

List of other hemes in pdb:2wp9

ID of heme Distortion Axial ligands on heme Function & structure
2wp9-C-1129
sad. -0.51
ruf. +0.60
dom. -0.22
bre. -0.28
HIS chainID: C,
resSeq: 84,
molecule: SUCCINATE DEHYDROGENASE CYTOCHROME B556 SUBUNIT
oxidoreductase
oligomeric count: 4
pocket vol.: 447.0 Å3
d(Fe-oop): 0.044 Å
HIS chainID: D, resSeq: 71,
molecule: SUCCINATE DEHYDROGENASE HYDROPHOBIC MEMBRANE ANCHOR SUBUNIT
2wp9-G-1129
sad. -0.63
ruf. +0.46
dom. -0.06
bre. -0.09
HIS chainID: G,
resSeq: 84,
molecule: SUCCINATE DEHYDROGENASE CYTOCHROME B556 SUBUNIT
oxidoreductase
oligomeric count: 4
pocket vol.: 439.0 Å3
d(Fe-oop): 0.090 Å
HIS chainID: H, resSeq: 71,
molecule: SUCCINATE DEHYDROGENASE HYDROPHOBIC MEMBRANE ANCHOR SUBUNIT