Browser

PyDISH No: 04639

PDB: 2wp9,
chainID: G, resSeq: 1129
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.7 Å

axial ligand #1: HIS

chainID: G,
resSeq: 84,
Coordination distance[Å]: 1.936
molecule: SUCCINATE DEHYDROGENASE CYTOCHROME B556 SUBUNIT
EC number: 1.3.5.1
Organism: ESCHERICHIA COLI

axial ligand #2: HIS

chainID: H,
resSeq: 71,
Coordination distance[Å]: 1.969
molecule: SUCCINATE DEHYDROGENASE HYDROPHOBIC MEMBRANE ANCHOR SUBUNIT
EC number: 1.3.5.1
Organism: ESCHERICHIA COLI

List of other hemes in pdb:2wp9

ID of heme Distortion Axial ligands on heme Function & structure
2wp9-C-1129
sad. -0.51
ruf. +0.60
dom. -0.22
bre. -0.28
HIS chainID: C,
resSeq: 84,
molecule: SUCCINATE DEHYDROGENASE CYTOCHROME B556 SUBUNIT
oxidoreductase
oligomeric count: 4
pocket vol.: 447.0 Å3
d(Fe-oop): 0.044 Å
HIS chainID: D, resSeq: 71,
molecule: SUCCINATE DEHYDROGENASE HYDROPHOBIC MEMBRANE ANCHOR SUBUNIT
2wp9-K-1129
sad. -0.55
ruf. +0.25
dom. -0.26
bre. -0.19
HIS chainID: K,
resSeq: 84,
molecule: SUCCINATE DEHYDROGENASE CYTOCHROME B556 SUBUNIT
oxidoreductase
oligomeric count: 4
pocket vol.: 437.0 Å3
d(Fe-oop): 0.097 Å
HIS chainID: L, resSeq: 71,
molecule: SUCCINATE DEHYDROGENASE HYDROPHOBIC MEMBRANE ANCHOR SUBUNIT