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PyDISH No: 04613

PDB: 2wdv,
chainID: K, resSeq: 1129
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 3.2 Å

axial ligand #1: HIS

chainID: K,
resSeq: 84,
Coordination distance[Å]: 1.966
molecule: SUCCINATE DEHYDROGENASE CYTOCHROME B556 SUBUNIT
EC number: 1.3.5.1
Organism: ESCHERICHIA COLI

axial ligand #2: HIS

chainID: L,
resSeq: 71,
Coordination distance[Å]: 1.941
molecule: SUCCINATE DEHYDROGENASE HYDROPHOBIC MEMBRANE ANCHOR PROTEIN
EC number: 1.3.5.1
Organism: ESCHERICHIA COLI

List of other hemes in pdb:2wdv

ID of heme Distortion Axial ligands on heme Function & structure
2wdv-C-1129
sad. -0.65
ruf. +0.32
dom. -0.20
bre. -0.06
HIS chainID: C,
resSeq: 84,
molecule: SUCCINATE DEHYDROGENASE CYTOCHROME B556 SUBUNIT
oxidoreductase
oligomeric count: 4
pocket vol.: 470.0 Å3
d(Fe-oop): 0.068 Å
HIS chainID: D, resSeq: 71,
molecule: SUCCINATE DEHYDROGENASE HYDROPHOBIC MEMBRANE ANCHOR PROTEIN
2wdv-G-1129
sad. -0.52
ruf. +0.54
dom. +0.05
bre. -0.11
HIS chainID: G,
resSeq: 84,
molecule: SUCCINATE DEHYDROGENASE CYTOCHROME B556 SUBUNIT
oxidoreductase
oligomeric count: 4
pocket vol.: 467.0 Å3
d(Fe-oop): 0.063 Å
HIS chainID: H, resSeq: 71,
molecule: SUCCINATE DEHYDROGENASE HYDROPHOBIC MEMBRANE ANCHOR PROTEIN