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Protein data
function: oxidoreductaseexperiment: X-RAY DIFFRACTION
resolution: 1.5 Å
axial ligand #1: LYS
chainID: A,resSeq: 188,
Coordination distance[Å]: 1.915
molecule: Eight-heme nitrite reductase
Organism: Thioalkalivibrio nitratireducens
axial ligand #2: HOH
chainID: A,resSeq: 2972,
Coordination distance[Å]: 2.142
molecule: water
List of other hemes in pdb:2ot4
| ID of heme | Distortion | Axial ligands on heme | Function & structure | |
|---|---|---|---|---|
2ot4-A-1005 |
sad. +1.14 ruf. -0.37 dom. -0.04 bre. -0.00 |
HIS | chainID: A, resSeq: 231, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 476.0 Å3 d(Fe-oop): 0.007 Å |
| HIS | chainID: A, resSeq: 398, molecule: Eight-heme nitrite reductase |
|||
2ot4-A-1006 |
sad. -0.23 ruf. -0.77 dom. +0.18 bre. -0.02 |
HIS | chainID: A, resSeq: 119, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 412.0 Å3 d(Fe-oop): 0.003 Å |
| HIS | chainID: A, resSeq: 300, molecule: Eight-heme nitrite reductase |
|||
2ot4-A-1007 |
sad. +0.76 ruf. -0.66 dom. -0.10 bre. +0.02 |
HIS | chainID: A, resSeq: 383, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 433.0 Å3 d(Fe-oop): 0.022 Å |
| HIS | chainID: A, resSeq: 491, molecule: Eight-heme nitrite reductase |
|||
2ot4-A-1008 |
sad. -0.47 ruf. -0.89 dom. +0.17 bre. +0.05 |
HIS | chainID: A, resSeq: 372, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 649.0 Å3 d(Fe-oop): 0.027 Å |
| HIS | chainID: A, resSeq: 415, molecule: Eight-heme nitrite reductase |
|||
2ot4-A-1002 |
sad. -0.12 ruf. -0.47 dom. +0.00 bre. -0.07 |
HIS | chainID: A, resSeq: 39, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 376.0 Å3 d(Fe-oop): 0.034 Å |
| HIS | chainID: A, resSeq: 234, molecule: Eight-heme nitrite reductase |
|||
2ot4-A-1003 |
sad. +0.35 ruf. -0.55 dom. +0.00 bre. -0.04 |
HIS | chainID: A, resSeq: 30, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 511.0 Å3 d(Fe-oop): 0.036 Å |
| HIS | chainID: A, resSeq: 70, molecule: Eight-heme nitrite reductase |
|||
2ot4-A-1001 |
sad. +0.04 ruf. -0.30 dom. -0.03 bre. -0.10 |
HIS | chainID: A, resSeq: 18, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 425.0 Å3 d(Fe-oop): 0.034 Å |
| HIS | chainID: A, resSeq: 44, molecule: Eight-heme nitrite reductase |
|||
2ot4-B-1004 |
sad. +0.54 ruf. -0.48 dom. +0.15 bre. -0.05 |
LYS | chainID: B, resSeq: 188, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 402.0 Å3 d(Fe-oop): 0.010 Å |
| HOH | chainID: B, resSeq: 2765, molecule: water |
|||
2ot4-B-1005 |
sad. +1.12 ruf. -0.35 dom. -0.03 bre. +0.04 |
HIS | chainID: B, resSeq: 231, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 492.0 Å3 d(Fe-oop): 0.024 Å |
| HIS | chainID: B, resSeq: 398, molecule: Eight-heme nitrite reductase |
|||
2ot4-B-1006 |
sad. -0.24 ruf. -0.79 dom. +0.21 bre. -0.01 |
HIS | chainID: B, resSeq: 119, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 409.0 Å3 d(Fe-oop): 0.008 Å |
| HIS | chainID: B, resSeq: 300, molecule: Eight-heme nitrite reductase |
|||
2ot4-B-1007 |
sad. +0.78 ruf. -0.67 dom. -0.13 bre. +0.00 |
HIS | chainID: B, resSeq: 383, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 423.0 Å3 d(Fe-oop): 0.023 Å |
| HIS | chainID: B, resSeq: 491, molecule: Eight-heme nitrite reductase |
|||
2ot4-B-1008 |
sad. -0.41 ruf. -1.06 dom. +0.21 bre. +0.10 |
HIS | chainID: B, resSeq: 372, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 652.0 Å3 d(Fe-oop): 0.005 Å |
| HIS | chainID: B, resSeq: 415, molecule: Eight-heme nitrite reductase |
|||
2ot4-B-1002 |
sad. -0.11 ruf. -0.39 dom. -0.00 bre. -0.05 |
HIS | chainID: B, resSeq: 39, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 355.0 Å3 d(Fe-oop): 0.026 Å |
| HIS | chainID: B, resSeq: 234, molecule: Eight-heme nitrite reductase |
|||
2ot4-B-1003 |
sad. +0.30 ruf. -0.53 dom. -0.01 bre. -0.03 |
HIS | chainID: B, resSeq: 30, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 515.0 Å3 d(Fe-oop): 0.021 Å |
| HIS | chainID: B, resSeq: 70, molecule: Eight-heme nitrite reductase |
|||
2ot4-B-1001 |
sad. -0.12 ruf. -0.36 dom. -0.07 bre. -0.11 |
HIS | chainID: B, resSeq: 18, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 411.0 Å3 d(Fe-oop): 0.044 Å |
| HIS | chainID: B, resSeq: 44, molecule: Eight-heme nitrite reductase |
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