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PyDISH No: 03808

PDB: 2ibz,
chainID: C, resSeq: 401
heme type: C

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.3 Å

axial ligand #1: HIS

chainID: C,
resSeq: 82,
Coordination distance[Å]: 1.987
molecule: Cytochrome b
EC number: 1.10.2.2
Organism: Saccharomyces cerevisiae

axial ligand #2: HIS

chainID: C,
resSeq: 183,
Coordination distance[Å]: 2.009
molecule: same as ligand #1

List of other hemes in pdb:2ibz

ID of heme Distortion Axial ligands on heme Function & structure
2ibz-C-402
sad. -0.64
ruf. -0.37
dom. +0.20
bre. -0.17
HIS chainID: C,
resSeq: 96,
molecule: Cytochrome b
oxidoreductase
oligomeric count: 11
pocket vol.: 408.0 Å3
d(Fe-oop): 0.014 Å
HIS chainID: C, resSeq: 197,
molecule: Cytochrome b
2ibz-D-3
sad. +0.11
ruf. -0.20
dom. -0.08
bre. -0.11
HIS chainID: D,
resSeq: 105,
molecule: Cytochrome c1, heme protein, mitochondrial precursor
oxidoreductase
oligomeric count: 11
pocket vol.: 416.0 Å3
d(Fe-oop): 0.011 Å
MET chainID: D, resSeq: 225,
molecule: Cytochrome c1, heme protein, mitochondrial precursor