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PyDISH No: 03710

PDB: 2gsm,
chainID: C, resSeq: 3001
heme type: A

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.0 Å

axial ligand #1: HIS

chainID: C,
resSeq: 102,
Coordination distance[Å]: 2.098
molecule: Cytochrome c oxidase subunit 1
EC number: 1.9.3.1
Organism: Rhodobacter sphaeroides

axial ligand #2: HIS

chainID: C,
resSeq: 421,
Coordination distance[Å]: 2.13
molecule: same as ligand #1

List of other hemes in pdb:2gsm

ID of heme Distortion Axial ligands on heme Function & structure
2gsm-A-2001
sad. -0.63
ruf. +0.21
dom. +0.21
bre. +0.04
HIS chainID: A,
resSeq: 102,
molecule: Cytochrome c oxidase subunit 1
oxidoreductase
oligomeric count: 2
pocket vol.: 588.0 Å3
d(Fe-oop): 0.003 Å
HIS chainID: A, resSeq: 421,
molecule: Cytochrome c oxidase subunit 1
2gsm-A-2002
sad. -0.26
ruf. +0.04
dom. +0.40
bre. -0.34
HIS chainID: A,
resSeq: 419,
molecule: Cytochrome c oxidase subunit 1
oxidoreductase
oligomeric count: 2
pocket vol.: 674.0 Å3
d(Fe-oop): 0.177 Å
HOH chainID: A, resSeq: 6506,
molecule: water
2gsm-C-3002
sad. -0.28
ruf. +0.06
dom. +0.52
bre. -0.33
HIS chainID: C,
resSeq: 419,
molecule: Cytochrome c oxidase subunit 1
oxidoreductase
oligomeric count: 2
pocket vol.: 710.0 Å3
d(Fe-oop): 0.179 Å
HOH chainID: C, resSeq: 1006,
molecule: water